Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1040 ATGAATTTGTCAAGGCAAGGTTTAACGGGCTTGATCCCTCCTTCGTTTGCTAATTTAAGGGTTCAATACCTAAGAGCTTCACAACATTGCCTAGAGTTTCTAGACTTGTCTTATAACAACCTATCTGGAGACAGTTCTCAAACGCATCCACCTGCATTCCCAATTCCTTGGAGGATAGCAGGTGCATTAGCAATGGCGACATGTATTAGATTTGTAATAATTATTGTGATTATTTATAATGGAAAAAGGTGTCTTAATTTAATAAGAAAACTTTACTTCAAGAAAGTAAGAACCTTTTTCAATCACAATGACGAGGAGGATTTCATGAAAAAACATAGCTTTTTGGCACTAAAGCAGTACAGTTATTCAGAAGTTAAAAAAATGACTAAGTCATTCCAACATAAATTAGGACAAGGAGGATTTGAAACTGTGTACAAAGGAACCTTATACGATGATATTCCTATTGCGGTAAAAGTGATAAGTGAATCAAAGGGAACTGGAGAAGAATTCATGAACGAAGTTGTTAGCATAAGTAGAACATCACATGTCAATATAGTTTTACTTTTTGGATTTTGTTATGAAAAAAATAAAAGGGCACTTAGTTTTGTCCAAAAAATTTCTGATTTTGTACTAGTTAAATTGTGCAAAAAAAAAGAGAGCATAATATTTTTATTGGGTGCTAGAGAAACTGTCAGATACATTGCTCCAAAAGTTTTAACTCGAAAATATGGTAGAGTTTCTCATAAATATGATTTAGAGGAAGAAATTATGAATGCGGAAAATCACATACTAGTTGAGATAACATTCATTCAAGTTATTCTTCAATCATCGAAGAAGAAGCTGAGATATTAA 852 0.3263 MNLSRQGLTGLIPPSFANLRVQYLRASQHCLEFLDLSYNNLSGDSSQTHPPAFPIPWRIAGALAMATCIRFVIIIVIIYNGKRCLNLIRKLYFKKVRTFFNHNDEEDFMKKHSFLALKQYSYSEVKKMTKSFQHKLGQGGFETVYKGTLYDDIPIAVKVISESKGTGEEFMNEVVSISRTSHVNIVLLFGFCYEKNKRALSFVQKISDFVLVKLCKKKESIIFLLGARETVRYIAPKVLTRKYGRVSHKYDLEEEIMNAENHILVEITFIQVILQSSKKKLRY* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1040 283 Gene3D Ribonuclease Inhibitor 1 56 IPR032675 -
Amo05g1040 283 SUPERFAMILY Protein kinase-like (PK-like) 113 251 IPR011009 -
Amo05g1040 283 PANTHER RUST RESISTANCE KINASE LR10-RELATED 202 251 IPR045874 GO:0004672
Amo05g1040 283 PANTHER - 202 251 - -
Amo05g1040 283 Gene3D Phosphorylase Kinase; domain 1 100 203 - -
Amo05g1040 283 SMART tyrkin_6 130 281 IPR020635 GO:0004713|GO:0006468
Amo05g1040 283 PANTHER - 60 200 - -
Amo05g1040 283 PANTHER RUST RESISTANCE KINASE LR10-RELATED 60 200 IPR045874 GO:0004672
Amo05g1040 283 ProSiteProfiles Protein kinase domain profile. 130 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1040 283 Pfam Protein tyrosine and serine/threonine kinase 132 197 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1040 Amo-Chr5 13707237 13708455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1040 59 252 Receptor kinase-like Gene Family AT4G18250 36.680 2.63e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo05g1040 PK_Tyr_Ser-Thr 3.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1040 - - adu:107486915 171.014