Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1023 ATGGGTCTCTGCAATTCGAAACCCTACTCGAATCCCACCCGTTCTTCTCGAAATTTCGATCCTCATGGCAATTCTTCAACAGCTAATAATAATGATGGTGCTGGAGCTCATTCCAGCTCCGTTAATGGCGGAAACCCTAGCGCTGACGCACCCAACGACGGCGTTAAGAGATCCCCGTTCTTCCCATTCTACACTCCGAGTCCGGCGCATTACTGGTTCTCCAAGAAGTCGCCGGCGGCGAGATCTCCGGCGACGTCCGACTCCACGCCCAGGCGGTTCTTCAAACGGCCGTTCCCGCCGCCATCTCCTGCGAAACACATAAGGGCGGTGCTCGCCCGGCGGCACGGTTCGGTGAAGCCTAACGAGGCCACCATACCGGAAGGTAGCGAGGCCGATGAGGTGGTTGCGCTGGATAAGAATTTCGGGTTTTCGAAGCATTTTGGAAACAAATTTGAGGTTGGAAGTGAAGTTGGGAGAGGGCATTTTGGGTACACCTGTGCTGCCAAGTTCAAAAAAGGGGAACTGAAGGGGCAGCAGGTGGCAGTGAAAGTCACCCCCAAAGCTAAGATGACTACTGCCATTGCAATTGAGGATGTCAGAAGAGAAGTAAAAATATTGAGAGCTCTAACTGGGCACAAGAATCTTGTACAGTTCTACGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAATTGTGTGAAGGAGGGGAGCTGTTAGACAGAATCCTATCAAGGGGTGGAAAATACACTGAGGAAGATGCAAAGGCTGTCTTGAGACAAATATTAAATGTTGTTGCGTTTTGCCATCTGCAGGGTGTTGTACATCGTGATCTTAAACCTGAGAACTTTTTGTTCACATCTAAGGATGACAACTCGGAGCTAAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGTGCGTATTATGTGGCTCCTGAAGTTCTACATAGAGCTTACAGTACCGAGGCTGATATCTGGAGTATTGGAGTCATTGCATATATTTTATTATGTGGCAGCCGTCCCTTTTGGGCCCGAACTGAATCTGGTATCTTTCGTGCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGCTGAGGCAAGGAATTTTGTTAAGCGACTATTAAATAAAGATCCACGGAAAAGAATGACTGCAGCACAAGCATTGAGTCATCCATGGATTAAAAGCAACAAGGATGTAAAAGTACCCCTGGATATTCTAATATTCAAGCTCATGAAAGCATATATGCGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCACTGTCCAAGACGTTAACTGTAGACGAGCTATTTTATTTAAAGGAGCAGTTTACCTTTTGGAGCCAAACAAAAATGGAACCATTAGCCTTGGTGAAAAATGCAACAGATGCTATGAAGGAGTCACGCATTCCTGACTTCCTTGGATCACTTAATGCATTGCAATATAGGAGGATGGATTTTGATGAGTTTTGTGCAGCTACACTTAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCACGGTGTGCCTATGAACTTTTTGAAAAGGATGGAAACAGGGCTATAGTCATTGAAGAGCTAGCTTCGGAGCTTGGCCTTGGCCCATCTGTCCCTGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGAAGTTAA 1731 0.4581 MGLCNSKPYSNPTRSSRNFDPHGNSSTANNNDGAGAHSSSVNGGNPSADAPNDGVKRSPFFPFYTPSPAHYWFSKKSPAARSPATSDSTPRRFFKRPFPPPSPAKHIRAVLARRHGSVKPNEATIPEGSEADEVVALDKNFGFSKHFGNKFEVGSEVGRGHFGYTCAAKFKKGELKGQQVAVKVTPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDDNSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADIWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSAEARNFVKRLLNKDPRKRMTAAQALSHPWIKSNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLKEQFTFWSQTKMEPLALVKNATDAMKESRIPDFLGSLNALQYRRMDFDEFCAATLSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGS* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1023 576 MobiDBLite consensus disorder prediction 1 47 - -
Amo05g1023 576 Gene3D Phosphorylase Kinase; domain 1 144 239 - -
Amo05g1023 576 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1023 576 SUPERFAMILY EF-hand 446 552 IPR011992 -
Amo05g1023 576 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 57 575 - -
Amo05g1023 576 Gene3D - 428 555 - -
Amo05g1023 576 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Amo05g1023 576 ProSiteProfiles Protein kinase domain profile. 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1023 576 Gene3D Transferase(Phosphotransferase) domain 1 240 425 - -
Amo05g1023 576 SMART serkin_6 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1023 576 SUPERFAMILY Protein kinase-like (PK-like) 148 449 IPR011009 -
Amo05g1023 576 Gene3D - 453 515 - -
Amo05g1023 576 CDD STKc_CAMK 150 412 - -
Amo05g1023 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Amo05g1023 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 575 - -
Amo05g1023 576 MobiDBLite consensus disorder prediction 74 100 - -
Amo05g1023 576 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1023 Amo-Chr5 13521973 13526653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1023 1 575 EF-hand Containing Proteins AT3G50530 75.000 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo05g1023 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1023 K00924 - vvi:100264733 946.036