Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1020 ATGGGTCTCTGCAATTCGAAACCCTACTCGAATCCCACCCGTTCTTCTCGAAATTTCGATCCTCATGGCAATTCTTCAACAGCTAATAATAATGATGGTGCTGGAGCTCATTCCAGCTCCGTTAATGGCGGAAACCCTAGCGCTGACGCACCCAACGACGGCGTTAAGAGATCCCCGTTCTTCCCATTCTACACTCCGAGTCCGGCACATTACTGGTTCTCCAAGAAGTCGCCGGCGGCGAGATCTCCGGCGACCTCCGACTCCACGCCCAGGCGGTTCTTCAAACGGCCGTTCCCGCCGCCATCTCCTGCGAAACACATAAGGGCGGTGCTCGCCCGGCGGCACGGTTCGGTGAAGCCTAACGAGGCCACCATACCGGAAGGTAGCGAGGCCGATGAGGTGGTTGCGCTGGATAAGAATTTCGGGTTTTCGAAGCATTTTGGAAACAAATTTGAGGTTGGAAGTGAAGTTGGAAGAGGGCATTTTGGGTACACCTGTGCTGCCAAGTTCAAAAAAGGGGAACTGAAGGGGCAGCAGGTGGCAGTGAAAGTCATCCCCAAAGCTAAGATGACTACTGCCATTGCAATTGAGGATGTCCGAAGAGAAGTAAAAATATTGAGAGCTCTAACTGGGCACAAGAATCTTGTACAGTTCTACGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAATTGTGTGAAGGAGGGGAGCTGTTAGACAGAATCCTATCAAGGGGTGGAAAATACACTGAGGAAGATGCAAAGGCTGTCTTGAGACAAATATTAAATGTTGTTGCGTTTTGCCACCTGCAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTTTTGTTCACATCTAAGGATGACAACTCGGAGCTAAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGTGCGTATTATGTGGCTCCTGAAGTTCTACATAGAGCTTACAGTACTGAGGCTGATATCTGGAGTATTGGAGTCATTGCATATATTTTATTATGTGGCAGCCGTCCCTTTTGGGCCCGAACTGAATCTGGTATCTTTCGTGCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGCTGAGGCAAGGAATTTTGTTAAGCGACTATTAAATAAAGATCCACGGAAAAGAATGACTGCAGCACAAGCATTGAGTCATCCATGGATTAAAAGCAACAAGGATGTAAAAGTACCCCTGGATATTCTAATATTCAAGCTCATGAAAGCATATATGCGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCACTGTCCAAGACGTTAACTGTAGACGAGCTATTTTATTTAAAGGAGCAGTTTACACTTTTGGAGCCAAACAAAAATGGAACCATTAGCCTGGAGAACATCAAAGCGGCCTTGGTGAAAAATGCAACAGATGCTATGAAGGAGTCACGCATTCCTGACTTCCTTGGATCACTTAATGCATTGCAATATAGGAGGATGGATTTTGATGAGTTTTGTGCAGCTACACTTAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCACGGTGTGCCTATGAACTTTTTGAAAAGGATGGAAACAGGGCTATAGTCATTGAAGAGCTAGCTTCGGAGCTTGGCCTTGGCCCATCTGTCCCTGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGTAAGTTAAGCTTCCTTGGATTTGTGAAATTGCTGCATGGCCCATCTCGAAGTCTTGTAAAAGCTCAGTAG 1815 0.4579 MGLCNSKPYSNPTRSSRNFDPHGNSSTANNNDGAGAHSSSVNGGNPSADAPNDGVKRSPFFPFYTPSPAHYWFSKKSPAARSPATSDSTPRRFFKRPFPPPSPAKHIRAVLARRHGSVKPNEATIPEGSEADEVVALDKNFGFSKHFGNKFEVGSEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDDNSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADIWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSAEARNFVKRLLNKDPRKRMTAAQALSHPWIKSNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLKEQFTLLEPNKNGTISLENIKAALVKNATDAMKESRIPDFLGSLNALQYRRMDFDEFCAATLSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKAQ* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1020 604 MobiDBLite consensus disorder prediction 1 47 - -
Amo05g1020 604 ProSiteProfiles Protein kinase domain profile. 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1020 604 Gene3D - 437 595 - -
Amo05g1020 604 Gene3D Phosphorylase Kinase; domain 1 144 240 - -
Amo05g1020 604 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Amo05g1020 604 SUPERFAMILY Protein kinase-like (PK-like) 148 441 IPR011009 -
Amo05g1020 604 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 599 - -
Amo05g1020 604 SMART serkin_6 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1020 604 SUPERFAMILY EF-hand 441 595 IPR011992 -
Amo05g1020 604 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 57 599 - -
Amo05g1020 604 CDD STKc_CAMK 150 412 - -
Amo05g1020 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Amo05g1020 604 Gene3D Transferase(Phosphotransferase) domain 1 241 436 - -
Amo05g1020 604 MobiDBLite consensus disorder prediction 74 100 - -
Amo05g1020 604 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Amo05g1020 604 MobiDBLite consensus disorder prediction 1 54 - -
Amo05g1020 604 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1020 Amo-Chr5 13377542 13382246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1020 1 604 EF-hand Containing Proteins AT3G50530 77.273 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo05g1020 Pkinase 3.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1020 K00924 - vvi:100264733 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0018 01 735964 744186 Amo05g1020 05 13377542 13382246 PCT