Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1004 CGCCTCCTTAATAGACTTTTAAATCAATTAACACGCAAATATATAACTTCCTTTTTTCAAAGGATTTCGTTTCCTTTTTCGAATTTCTTGCCTTCTTTGTTCGATCTCGTTCGTGCGTTTCTCTTTGCCTTTTCATTCGTTGTTTACGTTCGTTTCTCACTAGTTTCTCCTTCGTTATTTACGTGTTTTCTGAAATCAAGCTTTGAAATCGTTTTGAAGATAATGGATGATTCAACTTCAGATTGTCAGCTGAACCAGTGCGAAGTGGATTTTGAATTTGAATCGAATGAAGTTTCTGAGCCCTTCTGTGATGTTGATGATCAGTTTGTTCCCAAGGTTGGAATGACTTTTAACACCCTTAAAGATGCTGCAAAATTTTACAAGGACTATGCGAAGGCTACAGGTTTTTTTACAAGAGTTCGGAGCACAAATAAGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGAGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACAAATCCCACAGCTGGTTTAAATTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTCGTGTTGCATCATTCACATCCTTGCTGTCCAACTCAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCTGTTCGTCGTACAATAGAGAATAATGAGGAAGCT 711 0.3783 RLLNRLLNQLTRKYITSFFQRISFPFSNFLPSLFDLVRAFLFAFSFVVYVRFSLVSPSLFTCFLKSSFEIVLKIMDDSTSDCQLNQCEVDFEFESNEVSEPFCDVDDQFVPKVGMTFNTLKDAAKFYKDYAKATGFFTRVRSTNKKGNEIKNQLITCSRERKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLHHSHPCCPTQAEMLKQHRELSMSVRRTIENNEEA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1004 237 Pfam FAR1 DNA-binding domain 125 210 IPR004330 -
Amo05g1004 237 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 96 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1004 Amo-Chr5 13139753 13140888 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g1004 FAR1 2.4e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1004 - - adu:110278638 284.648