Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0990 ATGTCATTTTCCTTGTTTTCAACGCCGCAGCAACAGCAATCGCCTTTCCAGCAGAGTAGCTTGTTTCAGCAGCCGCAACAGCAACAGCAGCAGCTCCAACTTCAATTTCAGCAGCAGCAGCAACAACAACAACTACAACTGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGTTGTTTCTGTTCACCAATGATAAAACTCCTGCTACTTACAGTACCAACTGGTCCGATCTACACCCTGATTCCCAGAAGTTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATCGGGACGAAAGCCAGAGGCTTGATCAATGTAGTCGTCTTTATGATTCTTCTGTTTCCAATGATGGGTTTGAGCTTGATGCAAGCCACATTGTTCAGGAACTTGGTGGAATCAGCACTGGTATGGAAAGACAGAAAACTGTGCTGCTGGAATTGATGTCTGTTGTCAAGGATATGTTACGCAACACTGAGGTAGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTTCTTCATCCCAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACTGCTGGTGCAACTGCATCATCTGGTCCAAGTAGCCAACCAACTGCTACATCTATAGTGCCTGTTTTTGACTTRTATAGTGGTCTTCCAAAGAAACCGTCACCCTTTTTACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAATGTCATCAGTGGATTGAAGAATTGGAGCAGCTTATTCTTTTGGACTCTGAGAGAAATGGTTCCTCTAATGGATCCTCGTTGTTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGATTTTTTTGTTCATGTGGCTGCAAAGGTCGAGAGCATTCATCAATATATTGAATCTATGAAATCAGCATACCTAGCTGATCAACGCCGACGGGGGGAGGTGAATGATCCATTTTTAGAGGCTGACCGGCGAGAAACTGCAAGACAAGAAGCCGCCTCGAAAAGAGTTCATCCGACGTTGCATTTACCTGCAAATTCACAGCCCTCAACTCAAGTTGCAGGGTTGTTTTCTAGTTCAGGAACTCAAGGAGCATTGGCTGCCCCACAGACATCCACAGCAACTACATCKTCATCAGGAAGTGGACTCTCTCTTTTTAGTACACCTTCTTCTGCTCCATCATCTTCTATGTCATRGTCTTTGTTTGCAACCCCATCAACTCCTGCCCTAGGGTCTTCTTGGTTTGGATCATCTACTGCTACACCTCAAACCTCACTTTTTGGTTCTACATCCTCCTTACCTGGTCCTGCTTCAACTCCTTCTTTGTTTAGTAATACTGCTCCCTTGTTTAGTTCAACTCCAGCTGGAAATTCGCTCTTCTCAAGTTCATTRGTGTCAGGTGCTGCAACAGGATCCGGTGCGAGCTTTGGAGGATCTAAAAATCCGCGGCCAAAATCCCGAACTGCTCGACGCTAA 1461 0.4565 MSFSLFSTPQQQQSPFQQSSLFQQPQQQQQQLQLQFQQQQQQQQLQLQQQQQQQQQQQLFLFTNDKTPATYSTNWSDLHPDSQKFLLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDASHIVQELGGISTGMERQKTVLLELMSVVKDMLRNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTAGATASSGPSSQPTATSIVPVFDLYSGLPKKPSPFLQQTVLRFEKYLGECHQWIEELEQLILLDSERNGSSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALAAPQTSTATTSSSGSGLSLFSTPSSAPSSSMSXSLFATPSTPALGSSWFGSSTATPQTSLFGSTSSLPGPASTPSLFSNTAPLFSSTPAGNSLFSSSLVSGAATGSGASFGGSKNPRPKSRTARR* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0990 486 MobiDBLite consensus disorder prediction 312 331 - -
Amo05g0990 486 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 482 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Amo05g0990 486 MobiDBLite consensus disorder prediction 312 385 - -
Amo05g0990 486 MobiDBLite consensus disorder prediction 1 20 - -
Amo05g0990 486 MobiDBLite consensus disorder prediction 336 385 - -
Amo05g0990 486 MobiDBLite consensus disorder prediction 420 486 - -
Amo05g0990 486 Coils Coil 37 58 - -
Amo05g0990 486 MobiDBLite consensus disorder prediction 176 200 - -
Amo05g0990 486 MobiDBLite consensus disorder prediction 420 477 - -
Amo05g0990 486 PANTHER NUCLEOPORIN P58/P45 6 482 - -
Amo05g0990 486 MobiDBLite consensus disorder prediction 179 200 - -
Amo05g0990 486 Gene3D - 219 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0990 Amo-Chr5 13032358 13037093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0990 59 486 NAC Transcription Factor Family AT4G37130 65.148 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0990 K14307 - gmx:100805204 595.119