Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0976 ATGTCATTTTCCTTGTTTTCAACGCCGCAGCAACAGCAATCGCCTTTCCAGCAGAGTAGCATGTTTCAGCAGCCGCAACAGCAACAGCAGCAGCTCCAACTTCAATTTCAGCAGCAGCAGCAACAACAACAACTACAACTGCAGCAGCAGCAGCAGCAACAGCAACAGCAGTTGTTTCTGTTCACCAATGATAAAACTCCTGCTACTTACAGTACCAACTGGTCCGATCTACACCCTGATTCCCAGAAGTTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATCGGGACGAAAGCCAGAGGCTTGATCAATGTAGTCGTCTTTATGATTCTTCTGTTTCCAATGATGGGTTTGAGCTTGATGCAAGCCACATTGTTCAGGAACTTGGTGGAATCAGCACTGGTATGGAAAGACAGAAAACTGTGCTGCTGGAATTGATGTCTGTTGTCAAGGATATGTTACGCAACACTGAGGTAGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTTCTTCATCCCAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACTGCTGGTGCAACTGCATCATCTGGTCCAAGTAGCCAACCAACTGCTACATCTATAGTGCCTGTTTTTGACTTTTATAGTGGTCTTCCAAAGAAACCGTCACCCTTTTTACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAATGTCATCAGTGGATTGAAGAATTGGAGCAGCTTATTCTTTTGGACTCTGAGAGAAATGGTTCCTCTAATGGATCCTCGTTGTTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGATTTTTTTGTTCATGTGGCTGCAAAGGTCGAGAGCATTCATCAATATATTGAATCTATGAAATCAGCATATCTAGCTGATCAACGCCGACGGGGGGAGGTGAATGATCCATTTTTAGAGGCTGACCGGCGAGAAACTGCAAGACAAGAAGCCGCCTCAAAAAGAGTTCACCCGACGTTGCATTTACCTGCAAATTCACAGCCCTCAACTCAAGTTGCAGGGTTGTTTTCTAGTTCAGGAACTCAAGGAGCATTGGCTGCCCCACAGACATCCACAGCAACTACATCATCATCAGGAAGTGGACTCTCTCTTTTTAGTACACCTTCTTCTGCTCCATCATCTTCTATGTCATCGTCTTTGTTTGCAACCCCATCAACTCCTGCCCTAGGGTCTTCTTGGTTTGGATCATCTACTGCTACACCTCAAACCTCACTTTTTGGTTCTACATCCTCCTTACCTGGTCCTGCTTCAACTCCTTCTTTGTTTAGTAATACTGCTCCCTTGTTTAGTTCAACTCCAGCTGGAAATTCGCTCTTCTCAAGTTCATTCGTGTCAGGTGCTGCAACAGGATCCGGTGCGAGCTTTGGAGGATCTAAAAATCCGCGGCCGAAAACCCGACCTGCTCGCCGCTAA 1458 0.4588 MSFSLFSTPQQQQSPFQQSSMFQQPQQQQQQLQLQFQQQQQQQQLQLQQQQQQQQQQLFLFTNDKTPATYSTNWSDLHPDSQKFLLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDASHIVQELGGISTGMERQKTVLLELMSVVKDMLRNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTAGATASSGPSSQPTATSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWIEELEQLILLDSERNGSSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALAAPQTSTATTSSSGSGLSLFSTPSSAPSSSMSSSLFATPSTPALGSSWFGSSTATPQTSLFGSTSSLPGPASTPSLFSNTAPLFSSTPAGNSLFSSSFVSGAATGSGASFGGSKNPRPKTRPARR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0976 485 MobiDBLite consensus disorder prediction 335 384 - -
Amo05g0976 485 MobiDBLite consensus disorder prediction 175 200 - -
Amo05g0976 485 MobiDBLite consensus disorder prediction 178 200 - -
Amo05g0976 485 PANTHER NUCLEOPORIN P58/P45 6 474 - -
Amo05g0976 485 Coils Coil 37 57 - -
Amo05g0976 485 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 474 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Amo05g0976 485 MobiDBLite consensus disorder prediction 311 330 - -
Amo05g0976 485 MobiDBLite consensus disorder prediction 463 485 - -
Amo05g0976 485 MobiDBLite consensus disorder prediction 1 22 - -
Amo05g0976 485 MobiDBLite consensus disorder prediction 311 384 - -
Amo05g0976 485 Gene3D - 218 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0976 Amo-Chr5 12845036 12849832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0976 58 485 NAC Transcription Factor Family AT4G37130 64.920 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0976 K14307 - gmx:100805204 591.267