Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0967 ATGCATGTCTCAGAAGCCTTTAATTCATGTTTCACTTCCTGGAAAACGCATAGAACCCACTGCCCACTGGTTTTTTCTCCTTCGTTCTATACCCACTACCCAACCCTGAAATTTGTTATCCTAGAACCCACTACCCAACCCTGTTTGATTTTTTTGCCTTCGTTCTATACCCAGCGTCCATTTAGCAAGAATGATCTCCTTCGAGTAACAGGTTCCGGAACTGGTACTCTGCTTTCGTGCGTCGGATTAGGTAAAGGTCACCTCCCTCCGACTCCGATAGTGCATTTTTTATCCGTTGAAGCTCAACCTCTGGTTGTCATCAAGCTTAGTTTAGCTTCCCGTAGTTGCTGCCATTGGCTCTGTTTATTGACATTTTTGGAAGATGATGCTGATGACGACGATGTGGATTCGCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAAGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGTCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACAGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCCAATCGTCGTCTAACTAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATATGCATCATGTTATTTCACGCAAAACATTTTCAAGAAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGGTGGAAGTTGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCTGTAGTCATATCTTCTGTGCCATGA 1215 0.4436 MHVSEAFNSCFTSWKTHRTHCPLVFSPSFYTHYPTLKFVILEPTTQPCLIFLPSFYTQRPFSKNDLLRVTGSGTGTLLSCVGLGKGHLPPTPIVHFLSVEAQPLVVIKLSLASRSCCHWLCLLTFLEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVKDNQGRIISRQLVCNKEGWRNMRYLDMDDRSRESRSLTRTKCPARLRVKLDYSCGRWKVSCFVESHNHDLTPPQFAHLVPANRRLTNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYERYASCYFTQNIFKKIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPVVISSVP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0967 404 Pfam FAR1 DNA-binding domain 174 264 IPR004330 -
Amo05g0967 404 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 157 279 IPR031052 GO:0006355
Amo05g0967 404 PANTHER OS03G0181600 PROTEIN 157 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0967 Amo-Chr5 12782069 12784698 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g0967 FAR1 6.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0967 - - adu:107460934 308.145