Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0946 ATGGTCTTCCCCGCAGTCACAGTCGCAATCGCCGTCTACGCAGTTTGTAGCTGCCATCATCCTCCGCGCAGTTCCCACCTGCTCACGGAAGCAATCTTCAGAGTTATAGCTGCTATTCTTCATCTTGGAAACATTAACTTTGCAAAATCAGAGGAAGAAACTGATTCATCAGTTCTAGAAAATGAAGAGTCCAAGTTGCATCTCCAAATAACCGCAGAACTTCTCATGTGCGATCCTAGTGCTTTGGAAGATGTACTTTGTAAGCGTGTGATGATTACCCCAGAGGAAGTTATTAAAAGAAGTCTTGATCCTCTTGGTGCAACGGTTAGCAGGGATGGTTTTAGCCAAAACACTATATTCTTGTTAGTCAAAAAATCAAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGATAACAGTAAAAAAAAAAAAACAAACCACGTCAAATTTCAAATTTCCATCCGCTGTTGATTGA 519 0.4066 MVFPAVTVAIAVYAVCSCHHPPRSSHLLTEAIFRVIAAILHLGNINFAKSEEETDSSVLENEESKLHLQITAELLMCDPSALEDVLCKRVMITPEEVIKRSLDPLGATVSRDGFSQNTIFLLVKKSNVSIGQDPESKCLIGVLDIYGFESFKITVKKKKQTTSNFKFPSAVD* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0946 172 Gene3D Myosin VI head, motor domain, U50 subdomain 29 158 - -
Amo05g0946 172 PANTHER MYOSIN 29 154 - -
Amo05g0946 172 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 29 154 - -
Amo05g0946 172 Pfam Myosin head (motor domain) 29 153 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo05g0946 172 ProSiteProfiles Myosin motor domain profile. 1 172 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo05g0946 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 153 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0946 Amo-Chr5 12516502 12520969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0946 30 152 Myosins gene family AT3G58160 67.188 1.48e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0946 K10357 - gmx:100803485 182.185