Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0893 ATGGCGGAGGAAACCAAGATTTTGGTCCTTGGACCAACCGGAGCCATTGGAAGGCACATAGTTTGGGCTAGTGTTAAAGCAGGTCACCCCACTTTTGCTTTGGTCAGGAAGAACGCTGCCGCTATTCCTAAACCTACCCTCATCACCGCCGCTAACCCCGAAAGTAAGGAACAACTTCTTGAGAGCTACCAGAAATCCGGCGTTACCCTGCTCGAGGGTGACATAAATGATCATGCAAGTTTGGTTAAGGCCATCAAGCAAGTTGATGTTGTGATCTGCGCAGCTGGTAGATTACTTATTGAGGATCAGGTGAAGATTATTGCAGCAATCAAAGAAGCTGGAAATGTAAAGAGGTTCTTCCCATCAGAATTTGGGCTTGATGTGGACCGCCACGACGCATTAGAACCCGTTAGGGAAGTTTTCGAGGAGAAGGCAAAAATCCGAAGATTAGTTGAGGAGGCAGGAATCCCCTACACTTACCTCTGCTGTCACGCCTTCACCGGTTACTTCTTGCGTAACTTGTCACAGCTTGATACCACAGTTCCTCCAAGGGATAAAGTATACATTCAAGGAGATGGAAATGTCAAAGGTGCTTATATTACTGAGGCAGATGTTGGTACCTATACAATTAAGGCAGCAGCAGACTCTAGAACTTTGAACAAAGCCTTTCACATAAGGCTCCCTAAAAATTATTTGACTTTCAACGAGGTGGTTTCATTGTGGGAGAAAAAGATTGGCAAGACCCTTGAGAGGATTTACGTTCCTGAGGAAAAAGTTATTGAACAAATCAAGGTGTCATCTTTCCCAAATAACTACCTGTTGGCGTTGTACCATTCACAGCAGATAAGGGGTGATGCAGTGTATGAGATTGACCCTGCTAAAGATGTAGAAGCTTATGAACTTTACCCTGATGTGAAATACACCACTGTTGATGAATATTTGAATCAATTTAAAAGCAAAGTTTTAGTTGTGGGAGGCACTGGATACATCGGAAAATTCATAGTTAATGCAAGCGCAAAAGCCGGACACCCCACGTTTGTTCTTGTCAAAGAGAGCAGCCTCTCTCATCCTCACAAATCCAACCTTATTCAAAGCTTCAAGAGTTCCGAGTCACCTTTCTATATGTTAGGTGATATAAGTGATCATTCAAGTCTTGTTAAAGCATTGAAGCAAGTTGATGTTGTCATCTCTGCTGTAAGTGGAGCACAAACGGAAGACCAACTCAACATTATATCAGCAATAAAAGAAGCTGGAAACATCAAGCCAGCAGCTAGTGCTCTTGCGGGGAAAGCGAAAATCAGAAGGGCGATTGAAGCTGAAGGATTCCCCATGCACCTTATTGTTTCGCTGTGGGAGAACAAGATTTTGAAGAACCTTGAAATATATTGTCCTGAGGATCAAATTATTAAGAACCAGGTTAAGTCACCTTTTCCTGTGAGCCTTCTCTTGTCATTATCCCACTCTGCGCTGGTTAAGGGAGATTGCACAAACTTTGAGATTGAACCTTCTTTTGGCGTGGAAGCTTCTCAACTATACCCCGAAGTGAAATACACCACTGTCGACACCTACTTGAATCAGTTTAAACACTCAACCAAGAGTGGTTATGAGCCGTCAGACACAGAGACAGAGTGGCAAGAGGTTCCGAGACATGAACGAGAAAGAAAGAACATTGCTTTGGATCCTGAAGATGCAAAAGCTTTCACTCTAATTGCCAAGAGTCCATTGGCACTACACAGGAGGCACCAATACAACCATTCCAAGTTCGAAACTGAAACCTCATCAGCCACCACAACAATAGCTTCTGTTCCAAGCCAACCTCGGAGAAGGCAACACCATAGCAAGTTTGAACACAAGGAGAAATATAAGCCCTTTGCCAAAACCAGATGTTGGGAGAACCGTGTCTCCTTACAGCAGAAAGCATCACGGTTCTTCAGATCAGTGACAGCACCAAGGTTGAGGGAACAGCAGAGAAGAACTACGTCTCCAATGGCCAGAGGCATGGTTCTCAATGCACCTTCAGTGGCAGAGATCAATGAAATCATAGCAGAGGTGAAACTATCCAATGACCCTAGCACTTTGGATGAGTCAATGACTTCCACCACTGAGTCTATTCAACCGGGTGATCTTTTCTTCTCTCGAGAAAGCAGTGCCTTGCAGGGCAAGAAATCTTCGCTGTTGCCCCAAAAACTTCAACAATATGGATATTATAGCCCAAGTCCTGCAGGAACCGCCATGAGTCCCCACATTAGAGGTCTCCCTGCTTCTTCCGTTGAGGATGAAAGCAACGGAAATGGCATGAACATCCGAGGAATCGCCTCATCTGGTGTGTCTAGATCAAGTTCAGCTGTTACAAGCAGAAAGGGCGGTAGCAGTATGACGAGCGATGGTAGTGTGAAGACAACTGATAGCATGAGGAAATTCACAGCCAACAGGAAGAAGAGCCAGAAGGATGCATCATGGTTTGCTTGCATGAGGACAGGAAACTGCAGGACATCGATGAAATCGCCGGAGCGTAAAAGGCCAATTGAGGCTTCTTTCATTGGCAGGGCTATTGTGGTGGAAACCCTCCCACAATTCTGGGCTGATAAGCACCAACCTGCTTCACTTAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAATTAGTGTCTCAGGGCTCTTGCCCTCATATTCTGCTCAAAGGACCCTCCGGTTCTGGGAAAAGAGAACTAGCAATGGCTCTTCTACGCGAAATATATGGTGATGCATGCTGCAATATGTCCCATGAGTTAAGGAGCTTCCCTATTCAGGACAAGAGGCCTATCAAAGTATGTGTTTCAATAGCATCTAGTGCGCATCACATGGAGCTCAATGTAAGCATGGAACCAAATGCTAAATATGCTTTGCTGGGATTAATCAAAGAAATTAGCAATATATATGCAATGACACCCGAAGTCAGCAATGTTAATTTCAAGCCTGATTATAAAGTAATACTTCTTTATGGCGTTGATAAAGCAGTGGAGAACATCCAGCACATGATTAAATGGATTATAGACCGGTATTCGGATATATGTAAACTAGTTCTCTGCTGTGAAGATGATGCAGCCATTGTTGAGCCTGTTAAAAACCGTTTTAAAATTATCAAAGTTGATGCACCTCAAACTCACCAAATTGCTGAAGTTCTTATTCATATAGCAAAGAGAGAGGAAATTGATGTATCCCTTAATTTTGCCGCAAAGATTGCCATAAAATCAAAGCAAACCCTGAGGAAAGCTATCATGGCACTCGAAGCTTGCAAGGCGCACAACTATCCATTTTCAGAAGAACAACCTATTCCAATTGGATGGGAGGACATGGTAATAGAAGTAGCTGCAGAGATTCTAGCTGATCCATCATTTTCACGGCAAGAAATTCTCTGCCTAACTTGCTTCCTGCTATATATGTATATATCGTTGATTTCGAAGTTAACATTAATTTAA 3468 0.4348 MAEETKILVLGPTGAIGRHIVWASVKAGHPTFALVRKNAAAIPKPTLITAANPESKEQLLESYQKSGVTLLEGDINDHASLVKAIKQVDVVICAAGRLLIEDQVKIIAAIKEAGNVKRFFPSEFGLDVDRHDALEPVREVFEEKAKIRRLVEEAGIPYTYLCCHAFTGYFLRNLSQLDTTVPPRDKVYIQGDGNVKGAYITEADVGTYTIKAAADSRTLNKAFHIRLPKNYLTFNEVVSLWEKKIGKTLERIYVPEEKVIEQIKVSSFPNNYLLALYHSQQIRGDAVYEIDPAKDVEAYELYPDVKYTTVDEYLNQFKSKVLVVGGTGYIGKFIVNASAKAGHPTFVLVKESSLSHPHKSNLIQSFKSSESPFYMLGDISDHSSLVKALKQVDVVISAVSGAQTEDQLNIISAIKEAGNIKPAASALAGKAKIRRAIEAEGFPMHLIVSLWENKILKNLEIYCPEDQIIKNQVKSPFPVSLLLSLSHSALVKGDCTNFEIEPSFGVEASQLYPEVKYTTVDTYLNQFKHSTKSGYEPSDTETEWQEVPRHERERKNIALDPEDAKAFTLIAKSPLALHRRHQYNHSKFETETSSATTTIASVPSQPRRRQHHSKFEHKEKYKPFAKTRCWENRVSLQQKASRFFRSVTAPRLREQQRRTTSPMARGMVLNAPSVAEINEIIAEVKLSNDPSTLDESMTSTTESIQPGDLFFSRESSALQGKKSSLLPQKLQQYGYYSPSPAGTAMSPHIRGLPASSVEDESNGNGMNIRGIASSGVSRSSSAVTSRKGGSSMTSDGSVKTTDSMRKFTANRKKSQKDASWFACMRTGNCRTSMKSPERKRPIEASFIGRAIVVETLPQFWADKHQPASLNGFICNKQEAQLLKELVSQGSCPHILLKGPSGSGKRELAMALLREIYGDACCNMSHELRSFPIQDKRPIKVCVSIASSAHHMELNVSMEPNAKYALLGLIKEISNIYAMTPEVSNVNFKPDYKVILLYGVDKAVENIQHMIKWIIDRYSDICKLVLCCEDDAAIVEPVKNRFKIIKVDAPQTHQIAEVLIHIAKREEIDVSLNFAAKIAIKSKQTLRKAIMALEACKAHNYPFSEEQPIPIGWEDMVIEVAAEILADPSFSRQEILCLTCFLLYMYISLISKLTLI* 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0893 1155 Gene3D - 858 1049 IPR027417 -
Amo05g0893 1155 PANTHER ISOFLAVONE REDUCTASE 319 443 - -
Amo05g0893 1155 PANTHER ISOFLAVONE REDUCTASE 447 528 - -
Amo05g0893 1155 PANTHER PINORESINOL REDUCTASE-RELATED 1 318 - -
Amo05g0893 1155 Pfam NmrA-like family 7 307 IPR008030 -
Amo05g0893 1155 Pfam NmrA-like family 321 421 IPR008030 -
Amo05g0893 1155 MobiDBLite consensus disorder prediction 769 811 - -
Amo05g0893 1155 PANTHER ISOFLAVONE REDUCTASE 1 318 - -
Amo05g0893 1155 MobiDBLite consensus disorder prediction 588 606 - -
Amo05g0893 1155 CDD PCBER_SDR_a 6 313 IPR045312 GO:0016491
Amo05g0893 1155 Gene3D - 316 443 - -
Amo05g0893 1155 Gene3D - 1051 1108 - -
Amo05g0893 1155 MobiDBLite consensus disorder prediction 769 804 - -
Amo05g0893 1155 PANTHER PINORESINOL REDUCTASE-RELATED 319 443 - -
Amo05g0893 1155 PANTHER PINORESINOL REDUCTASE-RELATED 447 528 - -
Amo05g0893 1155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 858 1101 IPR027417 -
Amo05g0893 1155 Gene3D - 6 302 - -
Amo05g0893 1155 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 319 447 IPR036291 -
Amo05g0893 1155 Gene3D - 163 314 - -
Amo05g0893 1155 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 291 IPR036291 -
Amo05g0893 1155 MobiDBLite consensus disorder prediction 587 616 - -
Amo05g0893 1155 CDD AAA 875 915 - -
Amo05g0893 1155 Gene3D - 444 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0893 Amo-Chr5 11606907 11619573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0893 859 1128 Core DNA Replication Machinery Family AT5G27740 37.500 5.10e-54 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0893 K10756 - gmx:100795321 728.783