Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0871 ATGTGGCCTCTGTATCTTGTAGCATTGATCATTATCTTGCCAACATTTTTGGCTTATAGATGGAAGAGTCCCACATGCAATGGAAGGCTTCCACCAGGTTCAATGGGGTTGCCACTTGTTGGTGAGACCCTTCAGTTCTTCTCTCCTAACACTTCTGATGACATTTCTCCCTTCATCAAGCACAGGATCAAAAGGTATGGATCAATATTCAAGACTAACTTGGTGGGGAGACCAGTGGTGGTATCAACAGACCCTGATCTGAATTACTTCATATTCCAGCAAGAGGGACAAGTGTTCCAGAGTTGGTACCCTGACACATTCACAGAGATCTTTGGGAGACAGAATGTAGGATCATTACATGGATTCATGTACAAGTACCTCAAGAACATGGTGCTGAGTCTCTTTGGTCCTGAAAGCCTTAAGAAGATGCTCTCTGAGGTTGAACATGCAGCATGCACTTCCTTACAACACTGGTCATGCCAGGACACTGTTGAACTCAAAGAAGCAACAGCCACCATGATATTTGATTTAACTGCCAAAAAACTCATCAGTTATGACTCCAAGAATTCATCAGAAAATCTAAGGGAGAACTTTGTTGCATTTATACAAGGACTTATCTCCTTCCCTCTTGACCTCCCAGGAACAGCATATCATAAATGTCTTCAGGGTAGGAAAAGGGCAATGAAGATGCTGAAGAAGATGCTTGAGGAAAGAAGAGCAAAGCCAAGGAAAGAGCAGAGTGATTTCTTTGACTATGTAGTTGAAGAACTCAAGAAAGAGGGAACAATCCTCACAGAAGCCATAGCCTTGGACCTCATGTTTGTCCTCCTCTTTGCAAGCTTTGAAACCACTTCTCTCGCAATCACTTACGCCATCAAAGTCCTCTCTCACAATCCCTTGGTCCTCAAGCAACTACAAGAAGAACATGAATCCATACTCAAAAGGCGCGAAGATCCTAACTCCGGAGTCACATGGAAAGAATACAAATCAATGACATATACATTTCAGTTCATTAATGAAACTGTGAGACTTGCAAATATAGTTCCAGGAATCTTCAGAAAGGCACTAAGGGAAATTAATTTCAAAGGATATACCATACCAGCAGGTTGGGCAGTAATGGTGTGTCCCCCAGCTGTTCACTTAAGTCCAGCCAAATATCAAGATCCTCTCTCCTTCAACCCTTCCAGATGGGAGGGAATAGAATTGAATGGTGCAACCAGACAATTCATGGCTTTCGGCGGCGGCATGAGATTTTGTGTTGGAACAGACTTCACTAAGGTTCAGATGGCTGTCTTTATTCATTGCTTGGTGACCAAGTACAGGTGGAACCCTATCAAAGGAGGGAATATTACTAGAACGCCTGGATTACAATTTCCAGATGGATTTCATGTTCAGATGATTAAAAGAGATCAAAGTAATCAAGAATGA 1428 0.4244 MWPLYLVALIIILPTFLAYRWKSPTCNGRLPPGSMGLPLVGETLQFFSPNTSDDISPFIKHRIKRYGSIFKTNLVGRPVVVSTDPDLNYFIFQQEGQVFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLSLFGPESLKKMLSEVEHAACTSLQHWSCQDTVELKEATATMIFDLTAKKLISYDSKNSSENLRENFVAFIQGLISFPLDLPGTAYHKCLQGRKRAMKMLKKMLEERRAKPRKEQSDFFDYVVEELKKEGTILTEAIALDLMFVLLFASFETTSLAITYAIKVLSHNPLVLKQLQEEHESILKRREDPNSGVTWKEYKSMTYTFQFINETVRLANIVPGIFRKALREINFKGYTIPAGWAVMVCPPAVHLSPAKYQDPLSFNPSRWEGIELNGATRQFMAFGGGMRFCVGTDFTKVQMAVFIHCLVTKYRWNPIKGGNITRTPGLQFPDGFHVQMIKRDQSNQE* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0871 475 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 Gene3D Cytochrome P450 22 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 Pfam Cytochrome P450 31 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 10 467 - -
Amo05g0871 475 Coils Coil 473 475 - -
Amo05g0871 475 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0871 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Amo05g0871 475 PANTHER CYTOCHROME P450 26 10 467 - -
Amo05g0871 475 SUPERFAMILY Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0871 Amo-Chr5 10994712 10997901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0871 1 469 Cytochrome P450 AT1G12740 72.899 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0871 - - aip:107642960 947.192