Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0869 ATGTGGCCTCTGTATCTTGTAGCATTGATCATTATTTTGCCAACATTTTTGGCTTATAGATGGAAGAATCCTACATGCAATGGAAGGCTTCCACCAGGTTCAATGGGGTTGCCACTTGTTGGTGAGACCCTTCAGTTCTTCTCTCCTAACACTTCTGATGACATTTCTCCCTTCATCAAGCACAGGATCAAAAGGTATGGATCAATATTCAAGACTAACTTGGTGGGGAGACCAGTGGTGGTATCAACAGACCCCGATCTGAATTACTTCATATTCCAGCAAGAGGGACAAGTGTTCCAGAGTTGGTACCCTGATACATTCACAGAGATCTTTGGGAGACAGAATGTAGGATCATTACATGGATTCATGTACAAGTACCTCAAGAACATGGTGCTGAGTCTCTTTGGTCCTGAAAGCCTTAAGAAGATGCTCTCTGAGGTTGAACATGCAGCATGCACTTCCTTACAACACTGGTCATCCCAGGACACTGTTGAACTCAAAGAAGCAACAGCCACTATGATATTTGATTTTACTGCCAAAAAACTCATTAGTTATGACTCCAAGAATTCATCAGAGAATCTAAGGGAGAACTTTGTTGCATTTATACAAGGACTTATCTCCTTCCCTCTTGACCTACCAGGAACAGCGTATCATAAATGTCTTCAGGGTAGGAAAAGGGCAATGAAGATGCTGAAGAAGATGCTTGAAGAAAGAAAAGCAAAGCCAAGGAAAGAGCAGAGTGATTTCTTTGACTATGTAGTTGAAGAACTCAAGAAAGAGGGAACAATCCTCACAGAAGCCATAGCCTTGGACCTCATGTTTGTCCTCCTCTTTGCAAGCTTCGAAACCACTTCTCTCGCAATCACTTACGCCATCAAAGTCCTCTCTCACAATCCCTTGGTCCTCAAGCAATTACAATTCATTAATGAAACTGTGAGACTTGCAAATATAGCTCCAGGAATTTTTAGAAAGGCTCTAAGGGAAATTAATTTCAAAGGTAATGTATCTGACATGAACACCACCTCATGCAATGCAGGATATACCATACCAGCAGGTTGGGCAGTAATGGTGTGTCCCCCAGCTGTTCACTTGAGTCCAGCCAAATATCAAGATCCTCTCTCCTTCAACCCTTCCAGATGGGAGGGAATAGAATTGAATGGTGCAACCAGACAATTCATGGCTTTCGGCGGCGGCATGAGATTTTGTGTTGGAGCAGACTTCACTAAGGTTCAGATGGCTGTCTTTATTCATTGCTTGGTGACCAAGTACAGGTGGAACCCTATCAAAGGAGGGAATATTATTAGAACGCCTGGATTACAATTTCCAGATGGATTTCATGTTCAGATGATTAAAAAAGATCAAAGTAATCAAGAATCAGAACATCACAACTTAGAAACCAAAATACTCCCACGTTATGGTAGGAAATTACATTGA 1434 0.4191 MWPLYLVALIIILPTFLAYRWKNPTCNGRLPPGSMGLPLVGETLQFFSPNTSDDISPFIKHRIKRYGSIFKTNLVGRPVVVSTDPDLNYFIFQQEGQVFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLSLFGPESLKKMLSEVEHAACTSLQHWSSQDTVELKEATATMIFDFTAKKLISYDSKNSSENLRENFVAFIQGLISFPLDLPGTAYHKCLQGRKRAMKMLKKMLEERKAKPRKEQSDFFDYVVEELKKEGTILTEAIALDLMFVLLFASFETTSLAITYAIKVLSHNPLVLKQLQFINETVRLANIAPGIFRKALREINFKGNVSDMNTTSCNAGYTIPAGWAVMVCPPAVHLSPAKYQDPLSFNPSRWEGIELNGATRQFMAFGGGMRFCVGADFTKVQMAVFIHCLVTKYRWNPIKGGNIIRTPGLQFPDGFHVQMIKKDQSNQESEHHNLETKILPRYGRKLH* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0869 477 Gene3D Cytochrome P450 22 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PANTHER CYTOCHROME P450 26 306 450 - -
Amo05g0869 477 PANTHER CYTOCHROME P450 26 10 306 - -
Amo05g0869 477 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 10 306 - -
Amo05g0869 477 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 306 450 - -
Amo05g0869 477 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PRINTS P450 superfamily signature 393 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PRINTS P450 superfamily signature 306 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PRINTS E-class P450 group I signature 402 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PRINTS E-class P450 group I signature 392 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PRINTS E-class P450 group I signature 358 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 SUPERFAMILY Cytochrome P450 27 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 395 404 IPR017972 GO:0005506|GO:0016705
Amo05g0869 477 Pfam Cytochrome P450 306 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0869 477 Pfam Cytochrome P450 31 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0869 Amo-Chr5 10978550 10981944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0869 1 452 Cytochrome P450 AT1G12740 67.081 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0869 - - aip:107642960 906.36