Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0864 ATGGGTAAGGCAACAAAATGGTTTCGCGGGCTTTTTGGTCTCAGAAGGTCTTCTGACTCTGCACCACCACCCTCTACCGCCGCTCCAAAACCACACAAAGACAAACGCCGTTGGAGCTTCGTTAATTCTTACAGAGAGAATAAGAACCTCCACCAACATCGCCATCAGGTACGACTCCATGCTTCTTCTGCTCATGACCCTGCCATCGAGGTGGTAGCCGCCGCTGGACTCAAAAGCAGCGGCAGCGGCGGCAGAAGTGCCGTCTCTCGCGAAGAATGGGCAGCCGTTAAGATTCAGGCGGCATTTCGAGGCTGTTTGGCAAGGAGAGCACTAAGAGCGTTAAAAGGATTGGTGAAGCTGCAAGCGTTGGTGAGAGGTCACATTGAGAGGAAGCGCACTGCACAGTGGCTGAAAAGAATGCAAACTCTCTTGCGAGCTCAGGCCCGTGCCCGTGCCTGCCGGGCCCAAATTCTGCAGGCCCCTCACTTCCATGTTCCAGCAACACCAGAGAAATTTGAAACCCCAGTCCGTTCTTCCAGCATGGAATATAATCACTCGCCATCAGTACTCAAGAGAAATGGTTCTAGATCCCATGTCACCATTGGCAATCGAGACATCGAACGATCGTGGACTCAACGAAGATCATGGACAAGGACTTGTAGCATGGATGATGAAAGAAGCGCGGGGATTTTCGAAATTGACTCTGGAAAAGCACACAAAAATTCGAAACGCGGAAATCTCTTCGACTCGACAAGTCAGCCATTGGTTTCAGATCATTACAGGCAGAGTTTCGCCGCCACAAGGGACTCAACATCTCATCAATCGGGTCATAGTCCATATTCCTGTGAAGTTGAGGAGAATTCAGTGTGTGATGCTGTCAATTTTACTTATACTCCCACAAAGAGTGACGGCTCTAATAGAAGCTACCTAAGTAGTGGTTGTTGCGAGTACTATCCAAGTTACATGGCTTACACTGAATCTTCTAAAGCCAAGGTAAGATCTTTGAGTGCACCAAAACAAAGACTCCAATATGAGAGGTGTGGTTCATTCAATAGGTTCTCGCAAACACAAAGGGTATCATCTACAATGCGTGCAAGCTTCACTAGCAAAGCCTATCCAGGTTCTGGGCATTTGGACAACCTTGGATTGCCCCTCGGATATAGATACTGA 1170 0.4863 MGKATKWFRGLFGLRRSSDSAPPPSTAAPKPHKDKRRWSFVNSYRENKNLHQHRHQVRLHASSAHDPAIEVVAAAGLKSSGSGGRSAVSREEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQWLKRMQTLLRAQARARACRAQILQAPHFHVPATPEKFETPVRSSSMEYNHSPSVLKRNGSRSHVTIGNRDIERSWTQRRSWTRTCSMDDERSAGIFEIDSGKAHKNSKRGNLFDSTSQPLVSDHYRQSFAATRDSTSHQSGHSPYSCEVEENSVCDAVNFTYTPTKSDGSNRSYLSSGCCEYYPSYMAYTESSKAKVRSLSAPKQRLQYERCGSFNRFSQTQRVSSTMRASFTSKAYPGSGHLDNLGLPLGYRY* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0864 389 Gene3D - 92 133 - -
Amo05g0864 389 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Amo05g0864 389 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Amo05g0864 389 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Amo05g0864 389 MobiDBLite consensus disorder prediction 174 195 - -
Amo05g0864 389 MobiDBLite consensus disorder prediction 15 35 - -
Amo05g0864 389 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 384 - -
Amo05g0864 389 Pfam IQ calmodulin-binding motif 118 132 IPR000048 GO:0005515
Amo05g0864 389 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Amo05g0864 389 Pfam Protein of unknown function (DUF4005) 291 364 IPR025064 -
Amo05g0864 389 SMART iq_5 90 112 IPR000048 GO:0005515
Amo05g0864 389 SMART iq_5 113 134 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0864 Amo-Chr5 10936992 10940530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0864 68 389 IQD Protein Family AT4G23060 38.904 4.76e-47 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0864 - - ahf:112800814 702.59