Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo05g0804 | TCAAGGAAAGAGGCCAAACAAAGCAGTACAAGGAAGAATGATGAGATCACTATTACTTCATCAATTTCTGGCACTGATAATAATAATGCGGAGCTTTTAATCCTTGAGTACTCCATTTACAACTTGCTTGCCAGCATTGAGGAACTGGAGGATGCGAATTTGCCGCAATATGAGCCTCTGGAAGACGGGCAGCGAGTGATGAACCCTTTAGGACTGACGGAAACTGAGGTTGCAGCATGTATTGGACGGGAAATTTTCCAAACTGTTGGTGAGCAGCCTCAGAACATTGATGCATGCGGCATATGTCTGGAGGATTACGTTCACGGTGAAGAGCTTGGGAGATTGGATTGTGCGCACAGATATCACCTTTCTTGCATCAGTCAGTGGTTGCTCATCAAGAACAGATGCCCCGTTTGCAAGAAAATGGCTCTCACCATCATAGACTTGGAGGATGACGAGTAA | 462 | 0.4545 | SRKEAKQSSTRKNDEITITSSISGTDNNNAELLILEYSIYNLLASIEELEDANLPQYEPLEDGQRVMNPLGLTETEVAACIGREIFQTVGEQPQNIDACGICLEDYVHGEELGRLDCAHRYHLSCISQWLLIKNRCPVCKKMALTIIDLEDDE* | 154 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo05g0804 | 153 | Pfam | Ring finger domain | 98 | 140 | IPR001841 | - | |
Amo05g0804 | 153 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HIP1-RELATED | 66 | 144 | - | - | |
Amo05g0804 | 153 | SMART | ring_2 | 99 | 139 | IPR001841 | - | |
Amo05g0804 | 153 | SUPERFAMILY | RING/U-box | 98 | 146 | - | - | |
Amo05g0804 | 153 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 140 | IPR001841 | - | |
Amo05g0804 | 153 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 66 | 144 | IPR045191 | GO:0061630 | |
Amo05g0804 | 153 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 82 | 144 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo05g0804 | Amo-Chr5 | 9843899 | 9848320 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo05g0804 | 49 | 144 | C3H Transcription Factor Family | AT2G15530 | 38.614 | 3.36e-17 | 75.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo05g0804 | - | - | ahf:114925318 | 224.942 |