Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0784 ATGGTTGATTCAACGTCAGATTTTCAGTTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTATTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCYAAGGTTGCAGGTTTTTCTACAAGAGTTCGGAGCACAAATAGAAAGGGAAACGAGATTAAGAATCACTTGATTACATGTAGCAGAGAGGGAAMATGGAAATCTAAAATATCTCCGACCGAGAAGACAAATCCGACAGCCGGTTTAAACTGTCCCGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTTTTAGGAAAGTCCAAGCGCAATTCAGAGGAAAGGCGAATTGCATCACTAGATTAACGAATTCCGCTTTAGGCTATTCAGTATACGAAGTCGGAGAACAAGTTTCCAGCTCAATATTCAACAAGTTTGTGGTTACTTATGACTCAGTTGCAGCCGAGATATATACTGGAACGATGGAGCAAGAAGGTAAAGAGGCGACACACACACACCTCAAGAGCAGCCACGACGAGCCACTGATGGAGCCAAGAAGCAAGAGGTTTGACCAATTAGTTTTTCGTTCGCAAAATATTTGCGAATTTGCATCCGAATCGGAGGAGCTGACTGCATTTCTGCACCGTGCGTACGATAACGTCATGGCTGAGATGGAATCATTAAAAGCCAAACGGAAGGGGACATCTTTGTCCCACGAAGACGCCAACTTGGAATCTGTTAACGAGCTTCAAAGCCCGCCAAGGATCCGAACAAGAGGACGTCCAAAAAATAGGCTAGGTTCAAAGTTGGACAAACAGATTGCAAATGCCACAAAGAAGAAGAAAACGAAAGTTTTAAGCGAGATAAACCTGTTTGATGCTGCATCAGTGGTGCATTCAAATAACATCCAATATCAAGGACATGTTATGAATTATCAGTTTACGGTACCAGCAGCAGTGGATAACTCTTTGGGTGTATAG 1050 0.4248 MVDSTSDFQLNQGEVDYEFESNEVPEPLSVVDDQFIPKVGMTFTTLEDAGKFYRNYAKVAGFSTRVRSTNRKGNEIKNHLITCSREGXWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVFRKVQAQFRGKANCITRLTNSALGYSVYEVGEQVSSSIFNKFVVTYDSVAAEIYTGTMEQEGKEATHTHLKSSHDEPLMEPRSKRFDQLVFRSQNICEFASESEELTAFLHRAYDNVMAEMESLKAKRKGTSLSHEDANLESVNELQSPPRIRTRGRPKNRLGSKLDKQIANATKKKKTKVLSEINLFDAASVVHSNNIQYQGHVMNYQFTVPAAVDNSLGV* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0784 349 Pfam FAR1 DNA-binding domain 51 128 IPR004330 -
Amo05g0784 349 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 26 139 - -
Amo05g0784 349 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0784 Amo-Chr5 9625994 9629029 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g0784 FAR1 3.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0784 - - adu:110276980 367.466