Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0778 ATGCTTCGTCCAGCCACCGTCGTTGAAGCAACTGCCTTGCTTGCCGGTCATCTCTGGCGCTGTTCGAACTTCGAAGCCACCGTTGTTGCCGCAACTGGTCTCGCCTCGTTCCTCTATTGCGCAACCACTGTCCCGCCACGCCGCCTCTGTTCCACCGCGTCAGCCCTACTGTCGTGCTCCTTGTCTCACTCTGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGACGTCAAAAAAGCGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTTGCTGGAGATGACGAGGGATCGCAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTATTACAAGAAATGTAGCAATGAGTTGAATGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCATGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAAGTATGGAAGAATGCTCAACCATTCATTGATTGGCTTCGGAATGCTGAATCAGAATCGGAGGAAGGATGA 591 0.4873 MLRPATVVEATALLAGHLWRCSNFEATVVAATGLASFLYCATTVPPRRLCSTASALLSCSLSHSGSENGDTVNYATVEKMNALLEGLFDDVKKAFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFYYKKCSNELNEVALILKALYDVDLVEEEHVMHWYSKGLKGDKKDSQVWKNAQPFIDWLRNAESESEEG* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0778 196 Gene3D - 66 196 - -
Amo05g0778 196 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 69 195 IPR045196 GO:0003743|GO:0006413
Amo05g0778 196 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 69 195 - -
Amo05g0778 196 CDD W2_eIF5 66 194 - -
Amo05g0778 196 Pfam eIF4-gamma/eIF5/eIF2-epsilon 118 195 IPR003307 GO:0005515
Amo05g0778 196 SMART 542_3 104 192 IPR003307 GO:0005515
Amo05g0778 196 SUPERFAMILY ARM repeat 73 190 IPR016024 -
Amo05g0778 196 ProSiteProfiles W2 domain profile. 31 196 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0778 Amo-Chr5 9580079 9581057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0778 80 189 Eukaryotic Initiation Factors Gene Family AT1G77840 54.054 1.02e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0778 K03262 - ahf:112778866 280.411