Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0767 ATGGAGATTGCTCAGGTCGGTGTGAGGACAAGGGCTCAAGCTGCGTTAGCCATGGGAGCTYCCACGTCACCTCCAACAKCACCTAAGAGAAGGAAGATAAACAAAGCCAGGAGCAGTAATGAAGAGCGAAAATTATCAACGGCGTCGTCTTCAGCAATCGTTAAGCTCGGGAGAAGGAGGAGAAGCGCTGCTTCCGTCGTTGAGGCGGTTCTGCCGGAGGCGGCGACGGAGGAAAGGTGCTCTAGCCCTAACTCCGGTGAATTCCCGGCGTCTTGTTGTTGCAGCAATGGATCCGTTGGGCTTGACGAGGAGAGGATCGAGTTGTCAGATCTGGAGGTGGAGAGCGCGCAAGTTGAAACATCTACGTGCAATTGTGGAGACGAAACTGAAAGGAGAGAGATGAACCATGGAGGGCGAGACAATTCACAAGAGCTGGAGTCAGTGGAAACCGATTCTCGCCGTCCTTCGTCAACGGCGCAAAACATGCCAACGGAGTTGGAGCTCGAAGAATTCTTCGCCGCAGCTGAGAAAGACATCAAGAAAAGGTTTCAAGAAAAGTATAACTATGATATTGGGAATGACGTGCCGTTGGAAGGACGATACGAGTGGGTTGAATTGAAGCCATAG 627 0.5152 MEIAQVGVRTRAQAALAMGAXTSPPTXPKRRKINKARSSNEERKLSTASSSAIVKLGRRRRSAASVVEAVLPEAATEERCSSPNSGEFPASCCCSNGSVGLDEERIELSDLEVESAQVETSTCNCGDETERREMNHGGRDNSQELESVETDSRRPSSTAQNMPTELELEEFFAAAEKDIKKRFQEKYNYDIGNDVPLEGRYEWVELKP* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0767 208 PIRSF CKI_KRP_plant 3 208 IPR044275 GO:0004861|GO:0045736|GO:0051726
Amo05g0767 208 Gene3D p27 140 208 IPR044898 -
Amo05g0767 208 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 208 IPR044275 GO:0004861|GO:0045736|GO:0051726
Amo05g0767 208 MobiDBLite consensus disorder prediction 125 165 - -
Amo05g0767 208 Pfam Cyclin-dependent kinase inhibitor 162 206 IPR003175 GO:0004861|GO:0005634|GO:0051726
Amo05g0767 208 MobiDBLite consensus disorder prediction 125 151 - -
Amo05g0767 208 MobiDBLite consensus disorder prediction 15 53 - -
Amo05g0767 208 Coils Coil 101 121 - -
Amo05g0767 208 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 5 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0767 Amo-Chr5 9227555 9229889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0767 163 208 Core Cell Cycle Gene Families AT1G49620 69.565 2.43e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0767 - - adu:107487785 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0767 05 9227555 9229889 Amo01g1091 01 14433252 14435075 PCT
Amo01g1091 01 14433252 14435075 Amo05g0767 05 9227555 9229889 PCT