Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0716 ATGAGAACCCTCTGCAACGTATGCGAAAACGCCGCTGCAATTTTATTCTGCGCCGCCGACGAAGCTGCTCTTTGCCGCTCTTGCGATGACAAGTTCACACTTCATCTCCATGTTAATCAACTAATAATGGCTTCTGTAAGCTCATCAACAATCTTGCAGAAGCTAGATTCCAAGGATTTCATAGGCTTCCGATCATTGTTTCTTGAATACTTTAATGATCTCAACGAATTTTCCATGTCAAAAAACCAAAGGGAAGTACAATCGATCGCTGAGAAGTTTTATCCGTTTCTAATGGATTCCTTTGGAATTCTTCACAAACACTTGGAGAACATCTTCAAATCCAGCAAAGACAAGGAGATCCTCGCGGAACTGGTGAAGGTATACAAAATGTGCTTGGATTGCTTCGACAAAGTGGCCCCTGCGATGCAGCAACGCAAGCCGTATGTAGCGGAGTTTGAGAGACTAAATTTTATCAAGTATCTCGAGAAGTTCGGTTACATATCAGAAGCGGAAACCGAGTCTATAAGCTTGTCCAAGACGCTTCAAGACTCGAGTAAACCGACAGAGAGGAAGAGTAGGAAGCGTATACGTGCTGATCAGGATAAATGTTTGGGTTCTTTAATAGTTCAAAATGCTGTATTAATGGTGAGTTTGACGGCGGCATTGGGAGCCGATGACAATGACGATGTCGGTGATAGCCGCTTCAGGTCTTTGCTTTGTTTGTTGGAAGAAATGAGGCCGTGGCTAAGGAAAATAGATACAACTGAGAATTTGCGCATCAAGTTGGTGGATGATTTGTCTCGTAACGCCTTCAAATTGTTGAGAAGAACAAATTCTGACGAAGATTTGATAATTTCCTTCTGCCGTGTGACACTTACTGAGTATGTCAAATCTCCAAGAAAAGATAAAGTCTACGAGATTGCCCAAAGCATGTGCTCCTTACTGTTTGAACTGCATAAGAATAAACCGAATTATATTGCTAATGTACTGGATGTTATCCTGGATTGTGTTCTTTCTGAGTGCCAGCTTGGAGAGGGAAATGCTGGAACAAGGTTTATTGAAACTGTATATTTTTGTGTACGGAGTGCTACAGAAGCATGTACTCGTCGTACAGTTGCAGTATGTCTGAACAGAATAGCTGAACATTTTAAACAGGTTAATCCACTCATTTTTTCAATATTGAGGCTTTATGCCACTGGGTTGCTCCTTGATGATTCTACCTCTCAGTCCAGAATTGGAGATCCTGCATCCACCAGAAGTTTGAAGTTTGACTGTCAACTTGGAAACTTACTTAAACAACAGAACGTGCTGCAGACTTCCTTAGATTCGCTTTGTTCTGTCGCTGAGGCTTCACTGACTTACCTTCCATTTTGTTCCCACCCATTGAGATTCTTATGTTTACCTCTTGCTAATTCAATTGATGAAGAAATGTCTCAGTTTGTTAATAAAGTGGTGGATGCTTCTGTTGAAAAACTTATGTCCACAGTGCAAGATCAATTCCATATCCTTTGCAATAGTATTCTATCTAGTCCAAGCTTTACATCTGAAAAAAACACCAACGAATTTGCAGAGAAATGTCAAACAGTGATTAGTGTAGCTTTAGCAGCCTACACTATTTCAATCAGAACAAATCTTAAAGTCCAGGAGAGCAGTAAGTTAGTTAAGCAAATCATAGCCAGCAAATGGCTAACATATGAAAGCATTTCAAAGATATGTGGTTGTCTCAACGAAATTTTTGTCATTTTGTTCGCAGACAAGCATAAAAAGGCTTTAAAGGTTCTAAACCTGTATTGTACAGCATCATGGATCACGATTGAATATCACTGTTCGAAGCTAACCAGTGGGGCATTGAAAGAGTTGGTAAATAACTCTTGCAAAAGAAGCACTGAACTTTTAGATGCTCCTTATGACATCAATCCTAGAAAGATAAGAAAAAGACTGATTGAGATCCTTAAAAGCTGGTACACTGCCAACAGTCTATCTAAGGATTTGCCACCTCCTATGTTTGTAATGAAGTGGCTGATGAAGATAAAACAGGAACATGCTAAGCATATAAAAGAGGGAGTGGATTCATGTTCTACCGAATTCTCCAACAAGAACGTTAGCTTCATCCTGGAGCAGGAACTTATATCATATGAGGCAGAGAGTCTAGAACACCCAAAACATTCTCAGAAAATGCTGATGAAAATTACGAAGATCCTCCTGCAATACATATATATCACTGACGATTTGAAAAGAGCCCAGGCCCTACTAAGAAGGGGAAAAGCATTAAGGATTTGTACCACTGCTAGTCATGATGACTGCATTCAGTGTCTCACCGATGCAATAACTATCATGAAGAATTATGGTGAAATGAGTGCCAACAAAAACGTTATTGATCATCAGTTGGCTGTGGCCTATTGCCTACGTGCTTTATCTACCCAGGAAGCTGAACCAAAATCGGTGCGAATCTCTGAAGATGTTGAGAGTGCATTGGATCTGTGGTTGGACATTTCTCGTTTTGATTTCCCTGAGGACAGAGAGCGTTCTCAACCGTTTGATAGTATTATGGTTCTGCTCTACAACACAATTGATTTAGTTCAACTCAAGGGTTTCTTGAAACTCTCCAAGAAAGCATATCAGATGGTGATTAGAATCTTTAAACGGAAGTTCTCAACTGAGAAGTGGTTGACCTTACTATGGGAAAGTAGAAGGCTAAGACATGCCCTTTGCGCTTCCCCGATCAGTGATGCATTTATCCAGTCTTCACTAGACTTAGTTAATGAACTTTCAAAAGTTGACATCTGGACAAGTCACCTTCGAGAAAATCCTATACAATTAATAGGTTTTCAGCAGAATTTCTCATTTTTGTTTGCTAGTTCAGATACAGATTCTTCCTGTTATGAAGCCTGTTTTCAAAGAAAGATAACAATTGATGATGTTAAAAGCGCCGCAGAGAAACTTTCAAATGATTCTGTTCCACTTCATTCTACTTTTCTTCGCGGGAGTCTGTATTATGATTTATGCTCATGGCTCGTTGCAAATGGACAATTAAGAGAGGTATGTGCTATGTAA 3054 0.3988 MRTLCNVCENAAAILFCAADEAALCRSCDDKFTLHLHVNQLIMASVSSSTILQKLDSKDFIGFRSLFLEYFNDLNEFSMSKNQREVQSIAEKFYPFLMDSFGILHKHLENIFKSSKDKEILAELVKVYKMCLDCFDKVAPAMQQRKPYVAEFERLNFIKYLEKFGYISEAETESISLSKTLQDSSKPTERKSRKRIRADQDKCLGSLIVQNAVLMVSLTAALGADDNDDVGDSRFRSLLCLLEEMRPWLRKIDTTENLRIKLVDDLSRNAFKLLRRTNSDEDLIISFCRVTLTEYVKSPRKDKVYEIAQSMCSLLFELHKNKPNYIANVLDVILDCVLSECQLGEGNAGTRFIETVYFCVRSATEACTRRTVAVCLNRIAEHFKQVNPLIFSILRLYATGLLLDDSTSQSRIGDPASTRSLKFDCQLGNLLKQQNVLQTSLDSLCSVAEASLTYLPFCSHPLRFLCLPLANSIDEEMSQFVNKVVDASVEKLMSTVQDQFHILCNSILSSPSFTSEKNTNEFAEKCQTVISVALAAYTISIRTNLKVQESSKLVKQIIASKWLTYESISKICGCLNEIFVILFADKHKKALKVLNLYCTASWITIEYHCSKLTSGALKELVNNSCKRSTELLDAPYDINPRKIRKRLIEILKSWYTANSLSKDLPPPMFVMKWLMKIKQEHAKHIKEGVDSCSTEFSNKNVSFILEQELISYEAESLEHPKHSQKMLMKITKILLQYIYITDDLKRAQALLRRGKALRICTTASHDDCIQCLTDAITIMKNYGEMSANKNVIDHQLAVAYCLRALSTQEAEPKSVRISEDVESALDLWLDISRFDFPEDRERSQPFDSIMVLLYNTIDLVQLKGFLKLSKKAYQMVIRIFKRKFSTEKWLTLLWESRRLRHALCASPISDAFIQSSLDLVNELSKVDIWTSHLRENPIQLIGFQQNFSFLFASSDTDSSCYEACFQRKITIDDVKSAAEKLSNDSVPLHSTFLRGSLYYDLCSWLVANGQLREVCAM* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0716 1017 PANTHER EXTRA SPINDLE POLES 1-RELATED 83 1014 IPR005314 GO:0004197|GO:0005634|GO:0006508
Amo05g0716 1017 CDD Bbox1_BBX-like 4 32 - -
Amo05g0716 1017 ProSiteProfiles Zinc finger B-box type profile. 1 35 IPR000315 GO:0008270
Amo05g0716 1017 PANTHER BNAC04G05300D PROTEIN 83 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0716 Amo-Chr5 8687448 8693537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0716 1 31 C2C2-CO-like Transcription Factor Family AT4G38960 80.645 2.85e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0716 K02365 - adu:107487547 1900.95