Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0712 ATGGGATTCTGGGGGATTGAAGTTAAGCCCGGGAAGCCATATCCTTATCATGCAGACAACATCCAGGGAAAGCTTCATGTCACTCACGCTACACTAGGCATTGGTTCATCCAATGAGAAAACCATTCTTCAATGCTCTTCTGGACACAAAAGTCCAATTTTCTTGTGTTCATTGCTACCGAATAAGATTGAATCTTGCCCCTTGAATCTCGAGTTTGGTGATGATGACTTAGTGGCTTTCTCCGTCATTGGACCACAAAGCATCCATCTTTCTGGTTATTTTGTCGCAGATGATGGGGATGACCTTAGGGATGACTATGAATATGATTCATTCCCAGAGGATGTTGAGGGAGATACAGAGGATTCATCTGATTATGATACTGAAGGTGAATATGATGATGACTACACAGATGATAGTGATATGGAAATGTACCGATCTTCGCCTGTCCCAAATAGTGGAGTTAGAATTGAGGAAATAGTGGATGATGAAATGCCTGAAAATGAAGAAGATCCAGATCAGAAATTGAAGAAAAAGAAACAGGAAGCTCAGATGAAAGAGAAAGTTAACAAAATGTCTCCAATTAGGGGTGAGACTGGCCATCCTGTTTCGGAAAGTGAAGAAGATGATATGGAAAGTGAAGATGAGGATGGTTTTCCAATTTCTGCTGCTGAGAAAGTTAAATTTGAAGTTAAAGGAAACAATGCACATAAGACAGCTGAGGAGGCTGGCAAAAATGCAGAAGATGTTAATAATTCTCCAAGCTTAAAACGGAAAGTCGAAAGTGCCGATGGAGATGAACCGCAGCAGCAAGACAGGAAAAAGAAGAAGAAAAAGAACAAGTTGAAAGAACCTGGTAAAGGGGAAAGTGCTCAGGCACCTGGCAAAAGCATGATGACTGCTACACCAGATGGAAAACATCCAGAGGAGAAGGAAGTTAAGACTACAGAAGTGCATGATGAAAAACCATCCAATGAGGAGCTTGTTGAGAAGAAAAAGAAAAACAAAAAGAAGAACAAGGCTAAAGAGTCCCATGGAGGAGAAGCAACTCCAAGTCAAATTGATAAACCTGTTGAAAATAAGCTGTCTGCCTCAGAGAAAAAAGGAAAGAAACAAGAGACGGAAGCGAAGCCATCTCAAGTGAGAACCTTTCCAAATGGGTTGGTTATTGAGGAGATATCTATGGGTAAGCCAGATGGCAAAAGAGCAGCTCCTGGAAAGAAGGTCAGTGTTAAATATATTGGCAAGCTGCAGAAAAATGGGAAAATATTTGACTCGAATGTTGGAAGGGCACCCTTTAAATTTCACCTTGGTGTAGGACAAGTCATTAAGGGATGGGATATTGGTGTCAATGGGATGAGGGTTGGGGACAAAAGAAGAATCACAGTTCCACCATCTATGGGGTATGAACTTCTGTTCAGTAACTTCGTTTCTTTCTTCTTCACTCTTATTGCTAAGTGTCTTGTTTTATGTTTTTACAGATATGGTGACAGACGGGTTGGAAGTATACCACCAAATTCGTGGCTTGTGTTTGATGTTGAGTTAATTAATGTTGATCGCTGA 1560 0.4083 MGFWGIEVKPGKPYPYHADNIQGKLHVTHATLGIGSSNEKTILQCSSGHKSPIFLCSLLPNKIESCPLNLEFGDDDLVAFSVIGPQSIHLSGYFVADDGDDLRDDYEYDSFPEDVEGDTEDSSDYDTEGEYDDDYTDDSDMEMYRSSPVPNSGVRIEEIVDDEMPENEEDPDQKLKKKKQEAQMKEKVNKMSPIRGETGHPVSESEEDDMESEDEDGFPISAAEKVKFEVKGNNAHKTAEEAGKNAEDVNNSPSLKRKVESADGDEPQQQDRKKKKKKNKLKEPGKGESAQAPGKSMMTATPDGKHPEEKEVKTTEVHDEKPSNEELVEKKKKNKKKNKAKESHGGEATPSQIDKPVENKLSASEKKGKKQETEAKPSQVRTFPNGLVIEEISMGKPDGKRAAPGKKVSVKYIGKLQKNGKIFDSNVGRAPFKFHLGVGQVIKGWDIGVNGMRVGDKRRITVPPSMGYELLFSNFVSFFFTLIAKCLVLCFYRYGDRRVGSIPPNSWLVFDVELINVDR* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0712 519 MobiDBLite consensus disorder prediction 359 376 - -
Amo05g0712 519 Gene3D - 348 519 IPR046357 GO:0003755
Amo05g0712 519 MobiDBLite consensus disorder prediction 169 193 - -
Amo05g0712 519 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 258 469 - -
Amo05g0712 519 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 258 - -
Amo05g0712 519 MobiDBLite consensus disorder prediction 302 332 - -
Amo05g0712 519 MobiDBLite consensus disorder prediction 251 272 - -
Amo05g0712 519 MobiDBLite consensus disorder prediction 229 244 - -
Amo05g0712 519 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Amo05g0712 519 Gene3D Nucleoplasmin core domain 1 100 - -
Amo05g0712 519 MobiDBLite consensus disorder prediction 104 139 - -
Amo05g0712 519 SUPERFAMILY FKBP-like 374 517 - -
Amo05g0712 519 MobiDBLite consensus disorder prediction 104 380 - -
Amo05g0712 519 PANTHER PEPTIDYLPROLYL ISOMERASE 1 258 - -
Amo05g0712 519 PANTHER PEPTIDYLPROLYL ISOMERASE 258 469 - -
Amo05g0712 519 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 400 515 IPR001179 GO:0003755
Amo05g0712 519 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 405 518 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0712 Amo-Chr5 8603399 8606940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0712 405 515 Calmodulin-binding Proteins AT5G48570 38.261 2.35e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0712 K14826 - gmx:100792856 570.081