Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0699 ATGGGGTGCATCTGCTCAAAAGAAAAAGATAGAATTGATGATGAAGAAAAGAAAGAAAAAGGGATCAACAAGAATGGTGCATTACAAATCGAAATTGTTCCACCATCAGTCTCAACTACTAATACCTTTCCTACTGCACAATTAGGGGGTGTTCATGGTTTAATGGTGCCTCATTTGGTTAAATCATATGCACAAGTTGCTATGCCAGCAATATTAGAAGATAAAACCAATGACTTGTTATTAGATACTGCAAAACAAAAGCAACAAAAAAGGCAGCACCAGAGATGTAAAACAGTAGGAAGTGGTGAAAATGGAGGAATAGCTGCAAACAAATCAGTCATGAGAAGATTACTTAGCCTCTCGCATATCTCAGGAGAAAACATTGATGCCGGATGGCCAACGTGGTTATCTTCAGTGGCCGGAGAAGCCATCAAAGGGTGGCTTCCTCGACGAGCAGACTCCTTCGAAAAACTAGAGCAAATTGGACAAGGGGCTTATAGCAGTGTGCATAAAGCACTTGATCTTGAAAGTGGTAAATTTGTGGCCCTGAAAAAGGTTCGGTTCTTGAGTAGCGATCTGGCAAGCGTCCGATTCATGGCGAGGGAAATCCATATATTGCGCCAATTAAACCATCCCAATGTGATCAAGCTTGAGGGTCTTGTTGCATCTAGAACTTCCTCCAGTTTGTACCTTGTTTTTGAATACATGGAGCATGATCTTGCTGGATTAGCCGCCACCCCTGGAATCAAGTTCACTGAACCACAGATTAAATGCTTTATGCAGCAACTACTTAGGGGGCTTGAACACTGCCATAGTCGAGGTGTGCTGCACCGCGACATCAAGGGTTCCAATCTTCTAATTGACAACAATGGAAACCTTAAGATAGGAGATTTTGGTCTTGCAACTGTTTATGATCCGGAGAAGAATCAGCAATTAACTAGCCGCGTGGTGACTCTGTGGTACAGGGCACCTGAGCTTTTGTTAGGTGCTACAGAATATGGAGCCTCAATAGACATGTGGAGTGCTGGTTGTATTCTAGCTGAATTGCTCCTAGGGAAGCCTATTATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTTTGTGGTTCCCCATCTGAGGAATATTGGCAGAGAACAAAGTTTCCACATGCAACTAGTTTTAAACCACAGCAGCATTATGAACGCCAAATTGCCAAAACATTTAGAAAGGTCTCTTCTTCAGCACTAGCCCTTGTTGATAAGCTCCTATCTATGGAACCAGAAGATCGAGGATCTGCGACTTGCGCGCTTCAAAGCGAGTTCTTTACTACAGAACCCCTACCATGTGATCCATCAAGTTTACCAAAGTTTCCGCCCACCAAGGAGTTCGACGCCAAGAATCGAAACAAGGAAGTAGCAACGAAAAACACCGAAGCTGTAAGACAACGAGGATTGGTGTCTGAATTGTCGGATGCAGGACAAGATAAAAAACTACCTAGAACACCGGAGTATAATACCCGCGGAGATCTAACATTGAGGGGGAAACCAAATGGTGAGGCTCACTATAAAGTTGATCCAAGTAGATCAGTATGCAATCCAAGCTATGTACATAGTACAACAATGAACAGTGCAGCAATTACAAGACAATCTAAATTTAAGAGATTGGACTCATCTGTTGCCAAAACTCCCGAGTTGCGGACGCAGAAGTCTCAGATAAGTCGAGCAACGGCAGATTTCTCTAACTATTCAAGTAAATGGGAACAAGGAGCCATGCCTGGTCATCAAGAACCCATGATGAAAAGTAGGATCCACTGCTCAGGACCGTTGATGCCGCCGGGTGGGAACATCGACGATATGCTGAGAGAACATGAGAAACTAATGCAAGAGGCTTTCCGCACTGTGAAGATCAATTCTAGAAACTAA 1914 0.4342 MGCICSKEKDRIDDEEKKEKGINKNGALQIEIVPPSVSTTNTFPTAQLGGVHGLMVPHLVKSYAQVAMPAILEDKTNDLLLDTAKQKQQKRQHQRCKTVGSGENGGIAANKSVMRRLLSLSHISGENIDAGWPTWLSSVAGEAIKGWLPRRADSFEKLEQIGQGAYSSVHKALDLESGKFVALKKVRFLSSDLASVRFMAREIHILRQLNHPNVIKLEGLVASRTSSSLYLVFEYMEHDLAGLAATPGIKFTEPQIKCFMQQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIGDFGLATVYDPEKNQQLTSRVVTLWYRAPELLLGATEYGASIDMWSAGCILAELLLGKPIMPGRTEVEQMHKIFKLCGSPSEEYWQRTKFPHATSFKPQQHYERQIAKTFRKVSSSALALVDKLLSMEPEDRGSATCALQSEFFTTEPLPCDPSSLPKFPPTKEFDAKNRNKEVATKNTEAVRQRGLVSELSDAGQDKKLPRTPEYNTRGDLTLRGKPNGEAHYKVDPSRSVCNPSYVHSTTMNSAAITRQSKFKRLDSSVAKTPELRTQKSQISRATADFSNYSSKWEQGAMPGHQEPMMKSRIHCSGPLMPPGGNIDDMLREHEKLMQEAFRTVKINSRN* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0699 637 SUPERFAMILY Protein kinase-like (PK-like) 149 447 IPR011009 -
Amo05g0699 637 MobiDBLite consensus disorder prediction 485 523 - -
Amo05g0699 637 CDD STKc_CDK9_like 155 439 - -
Amo05g0699 637 ProSiteProfiles Protein kinase domain profile. 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0699 637 Pfam Protein kinase domain 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0699 637 SMART serkin_6 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0699 637 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 85 632 - -
Amo05g0699 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Amo05g0699 637 PANTHER CELL DIVISION PROTEIN KINASE 85 632 - -
Amo05g0699 637 ProSitePatterns Protein kinases ATP-binding region signature. 161 184 IPR017441 GO:0005524
Amo05g0699 637 Gene3D Transferase(Phosphotransferase) domain 1 243 479 - -
Amo05g0699 637 Gene3D Phosphorylase Kinase; domain 1 150 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0699 Amo-Chr5 8454089 8456769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0699 147 499 Core Cell Cycle Gene Families AT5G10270 48.011 9.55e-117 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Amo05g0699 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0699 K08819 - gmx:100817858 728.013