Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo05g0679 | AGGACCGCCAGGCTCCAACGAAACTTGAAAGTACAATCTGTTTTTTCTGGTAGCAGCAATGCAAGGACCAGGTCCGAGGGGGATGAATGCAAAAGAAAAATGTCTCAGCTTAATAATGTTCTACTTGTGTGGTTTCTCTTATTAAGTGTTGCACATGGTACTTCAGCTCAGCTAAGTCGACACCATTATGCAAAAATCTGCCCCAATGTTGAGAACATAGTCAGAGATGCAGTTAAGAAGAAGTTCCATGAAACATTTGTCACTGTCCCTGCTACCATTCGCCTCTTCTTCCATGATTGCTTTGTGAGGGGTTGTGATGCTTCAGTTTTGGTAGCTTCGACTCCAAACAACAAAGCAGAGAAGGATCATCCTGACAATCTCTCACTGGCCGGAGACGGCTTTGACACGGTGATCAGAGCAAAAGCAGCCGTGGATGCTGTCCCTCTCTGCAGAAATAAAGTCTCATGCGCAGATATTCTTACCATGGCAACCCGTGATGTTATTTCACTGGCTGGTGGACCGTACTATGAGGTTGAGTTAGGGAGATATGATGGGTTGAAGTCAAGGGCTTCAGATGTGAATGGGAAGCTGCCGCAGCCAGGGTTCAACTTGAACCAGCTCAATTCACTCTTCGCCGCGAACGGCCTTACCCAGACAGATATGATTGCTCTTTCAGGGGCTCACACCGTGGGGTTCTCTCATTGCAACAAGTTCAATAACAGAATCTACAATTTCAAGAGCCACACTAAAGTGGACCCCACACTCAACGACCTTTACGCCTCGCAGCTAAAATCTATGTGCCCGAGAAATGTGGATCCAAGGATTGCAATCGACATGGACCCAACAACACCACGGGCTTTCGATAACGCTTATTTCAAGAATCTTCAGAAGGGTATGGGCCTGTTCACCTCAGACCAAGTTCTGTTCATGGACCCAAGGTCCAAGCCCGCTGTGGAGGCGTTTGCTAGTAACAGCAAAACCTTCCACGCCAACTTCGTCGCTGCCATTACTAAGTTGGGCCGAGTTGGAATCAAGAATGCGCAAAATGGGAACATTCGTTCAGATTGCTCCATCATATGA | 1080 | 0.4722 | RTARLQRNLKVQSVFSGSSNARTRSEGDECKRKMSQLNNVLLVWFLLLSVAHGTSAQLSRHHYAKICPNVENIVRDAVKKKFHETFVTVPATIRLFFHDCFVRGCDASVLVASTPNNKAEKDHPDNLSLAGDGFDTVIRAKAAVDAVPLCRNKVSCADILTMATRDVISLAGGPYYEVELGRYDGLKSRASDVNGKLPQPGFNLNQLNSLFAANGLTQTDMIALSGAHTVGFSHCNKFNNRIYNFKSHTKVDPTLNDLYASQLKSMCPRNVDPRIAIDMDPTTPRAFDNAYFKNLQKGMGLFTSDQVLFMDPRSKPAVEAFASNSKTFHANFVAAITKLGRVGIKNAQNGNIRSDCSII* | 360 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo05g0679 | 359 | ProSitePatterns | Peroxidases active site signature. | 89 | 100 | IPR019794 | GO:0004601 | |
| Amo05g0679 | 359 | ProSiteProfiles | Plant heme peroxidase family profile. | 57 | 359 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | SUPERFAMILY | Heme-dependent peroxidases | 57 | 358 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | CDD | secretory_peroxidase | 57 | 357 | IPR033905 | GO:0004601|GO:0042744 | |
| Amo05g0679 | 359 | Pfam | Peroxidase | 74 | 324 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PANTHER | - | 39 | 359 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 172 | 187 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 334 | 347 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 67 | 86 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 91 | 111 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 294 | 311 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 278 | 293 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 153 | 163 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 219 | 231 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Plant peroxidase signature | 132 | 145 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 220 | 230 | IPR019793 | - | |
| Amo05g0679 | 359 | PRINTS | Haem peroxidase superfamily signature | 172 | 184 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Haem peroxidase superfamily signature | 280 | 295 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Haem peroxidase superfamily signature | 154 | 171 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Haem peroxidase superfamily signature | 220 | 235 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | PRINTS | Haem peroxidase superfamily signature | 89 | 103 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo05g0679 | 359 | Gene3D | Peroxidase, domain 2 | 198 | 339 | - | - | |
| Amo05g0679 | 359 | PANTHER | PEROXIDASE | 39 | 359 | - | - | |
| Amo05g0679 | 359 | Gene3D | - | 62 | 358 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo05g0679 | Amo-Chr5 | 8059307 | 8067351 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo05g0679 | 34 | 356 | Peroxidase | AT3G49960 | 66.462 | 1.39e-158 | 446 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo05g0679 | K00430 | - | gmx:100804350 | 549.28 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo01g1285 | 01 | 20780947 | 20784698 | Amo05g0679 | 05 | 8059307 | 8067351 | PCT | |
| Amo11g1018 | 11 | 29718989 | 29722289 | Amo05g0679 | 05 | 8059307 | 8067351 | PCT |