Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0677 ATGAATTTGAATCTAACGAAGTTCCTGAGACGCTCGGGTGTAGATCAGAACTTTTTGGATGTATTTTTGCGGGAAGTGTGGCCTCTCTCTGTTGTTGATGACCAGTTTGTTTCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTATGCCAAGGCTGCAGGTTTTTCTACAAGAGTTTGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGAAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACGAATCCGACAGCTAGTTTAAACTGTCCTACAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACTCTTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCATACAATAGAGAATAACGAGGAGGCT 492 0.4106 MNLNLTKFLRRSGVDQNFLDVFLREVWPLSVVDDQFVSKVGMTFTTLEDAGKFYRNYAKAAGFSTRVWSTNRKGNEIKNQLITCSREEKWKSKISPTEKTNPTASLNCPTRIYIHTLKDVGAWIISKVVLDHSHSCCPSKAEMLKQHRELSMSIRHTIENNEEA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0677 164 Pfam FAR1 DNA-binding domain 52 137 IPR004330 -
Amo05g0677 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0677 Amo-Chr5 8038304 8039310 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g0677 FAR1 3.9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0677 - - adu:110280446 256.529