Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0665 ATGGAACAACAACAAGCATCTGCTGATTCATCATCAACAAAAGAACCTACTCCTTTGGCTTCCAACACTGAAACGAAAACTCACTCCTCAAAACAAGTCTCTGTACAATCTGCTACTGCTCATGATTCACCATCCATTTTGCCTGCTTCTGGAATATCGTCTTGGGCAAAGAATCTGAAACTCCGACACTCGTTTTCGCCGCAGGCTGAAAATAATGGCGGATCGACCTTTGCTCGCCTCACTAGTAATCTAAGTCTAAAACTGCGACCGCCTTCCAATGAGGCTGCTCCCGCTACTAATTCAGGCAGTGAGCAGCCTAATTTAATTGAATCATTCACCAAAGGGTTGATGGACTCTTCCAAGAGTGCAGTTAAGGCAGTGCAGGTCAAAGCTCGCCATATGGTCTCTCAAAATAAACGTAGATACCAGGAAGATGGATTTGATTTGGATATGTCATACATCACTGAAAATATAATTGCTATGGGATTTCCAGGCGGTGATATTAGCTCCGGAATTTTCGGATACATTGAGGGGTTCTATCGGAATCACATGGAAGAAGTAATAAAATTCTTTGAAACTCACCATAAGGGAAAGTACAAAGTATACAATCTTTGTGCAGAGAGGTTATATGATGGATCGCTATTCCAGGGGAAGGTTGCGACTTTCCCGTTTACAGATCATAATTGCCCTCCTATTCAACTTATAGCCTCATTTTGTGAAAGTGCACATTCATGGTTGAAGGAGGATATTCAAAATGTAGTAGTTGTTCATTGTAAAGCTGGTATGGGGAGGACAGGATTAATGATTTGCAGCCTTCTTTTATTTCTGAAGTTCTTCTCAACTGCAGAGGAAGCCATAGATTACTTCAACCAGAAAAGATGTATAGATGGAAAGGGCTTAACTCTTCCTAGTCAAATCAGATATGTCAAATATTTTGAACGGACTTTGAAACAATTCGATGGCGAAGTCCCACCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTTCATAATTGCCCTTATTGGGTTAGGCCATCAATTACAATATCTGATCATAGTGGAATTCTATTCAGCACGAAAAGGCATCCAAAGACAAAGGATCTAATGCCCGAAGATTTCTGGATCAGTATACGGAAGAAAGGAGTAGTAGTTTTTGCACTACCTGGGGAGCCTGGTTTGACAGAGTTGGTTGGGGACTTCAAAATTCACTTCAATGATGGGCAGGGAGATTTCTACTGTTGGATGAATACAACAATGACAGAAAATCGAACCATTTTAGATGGCTCGGATCTCGATGGCTTTGACAAGAGAAAGATCCCCACTCCAGGATTCCAGGTCGAGGTTGTAATGGTCGACTATGATGGCACCGTACCAGCAAGAACCAAAGCCGGTCCTGCCAGCACAGAACCCGAAGACAACACAAACAAGGTCCAAGCTGGTGCAAAACTTGCGTCGAAGAGCAAGGTCCCTAAGAATGGTGATGATGATGATGTATTCTCAGATAGTGATGAAGAGAAGGATAGACAGAGCGGAAAATCTGAAACTGAATATAAGTTAGCGGCACCTCAAGGATCTGGGGATACTTCAGACCATGTAGGAGTGTTGACACATTCAACGAATCAGTTGCGCCTGCATGAGGAACGTAAGCAAAACAATGCTTCTCAAGAATCAACAACAGATAATAATATTCATGCATCCGGTAACACCACCAACATAGAGTCTGTAGGGGCAAGTGAAATCAAGGCAATTGCAGCAGATGCTTCGGTTTTTGCTTTTGGAGATGAAGATTTTGAAAGTGATTGA 1803 0.4254 MEQQQASADSSSTKEPTPLASNTETKTHSSKQVSVQSATAHDSPSILPASGISSWAKNLKLRHSFSPQAENNGGSTFARLTSNLSLKLRPPSNEAAPATNSGSEQPNLIESFTKGLMDSSKSAVKAVQVKARHMVSQNKRRYQEDGFDLDMSYITENIIAMGFPGGDISSGIFGYIEGFYRNHMEEVIKFFETHHKGKYKVYNLCAERLYDGSLFQGKVATFPFTDHNCPPIQLIASFCESAHSWLKEDIQNVVVVHCKAGMGRTGLMICSLLLFLKFFSTAEEAIDYFNQKRCIDGKGLTLPSQIRYVKYFERTLKQFDGEVPPGRRCMLRGFRLHNCPYWVRPSITISDHSGILFSTKRHPKTKDLMPEDFWISIRKKGVVVFALPGEPGLTELVGDFKIHFNDGQGDFYCWMNTTMTENRTILDGSDLDGFDKRKIPTPGFQVEVVMVDYDGTVPARTKAGPASTEPEDNTNKVQAGAKLASKSKVPKNGDDDDVFSDSDEEKDRQSGKSETEYKLAAPQGSGDTSDHVGVLTHSTNQLRLHEERKQNNASQESTTDNNIHASGNTTNIESVGASEIKAIAADASVFAFGDEDFESD* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0665 600 MobiDBLite consensus disorder prediction 467 481 - -
Amo05g0665 600 SMART PTEN_C2_2 324 452 IPR014020 -
Amo05g0665 600 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 254 293 IPR000387 GO:0016311|GO:0016791
Amo05g0665 600 MobiDBLite consensus disorder prediction 1 47 - -
Amo05g0665 600 ProSitePatterns Tyrosine specific protein phosphatases active site. 256 266 IPR016130 GO:0016311|GO:0016791
Amo05g0665 600 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 153 319 IPR029021 -
Amo05g0665 600 MobiDBLite consensus disorder prediction 460 570 - -
Amo05g0665 600 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 21 600 - -
Amo05g0665 600 Gene3D Protein tyrosine phosphatase superfamily 125 322 IPR029021 -
Amo05g0665 600 MobiDBLite consensus disorder prediction 554 570 - -
Amo05g0665 600 ProSiteProfiles C2 tensin-type domain profile. 326 453 IPR014020 -
Amo05g0665 600 ProSiteProfiles Phosphatase tensin-type domain profile. 140 319 IPR029023 -
Amo05g0665 600 CDD PTP_PTEN 150 314 IPR045101 GO:0016791
Amo05g0665 600 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 21 600 - -
Amo05g0665 600 Pfam Protein-tyrosine phosphatase 226 278 IPR000242 GO:0004725|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0665 Amo-Chr5 7875401 7882723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0665 18 600 Protein tyrosine phosphatase (PTP) family AT3G19420 59.504 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0665 K01110 - gmx:100801622 882.093