Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0664 ATGAAACAAACAACAAACAATGCAACAAACACAAACACCTTATCTGCTTTGAACATGAACATGCCTCACACACAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGATGATGATTCTCCCTCCTTCTTCGATGCTCTTCTCTGCGAAGAAGAGAAGAACATTCTCGATGATGATGATGACAACCACCAAAGCAGCCTTCTCATGGACAATCGGGAACACGACCACATCCTCTCTCTTCTCTCCAAAGAGACACACACTCACACCATTCATGCTTTTCTCGAGGCTCCACGAAACGACGCCGTCTCCTGGATTTCCAAAGTTAGCTGCTTCTATGGCTTCACTCCTTTGACCACTGTACTTGCAGTCAACTACTTCGACAGGTTCGTCACAAGCCTAACATTTCAGAGGGACAAGCCATGGATGACTCAGCTCACTGCTCTTGCCTGTTTATCTCTTGCTGCCAAAATGGAAGAGATCCATGTCCCACTTCTCTTAGACCTCCAAGTGGAGGAACCCAAGTTCTTGTTCGAAGCCAAGACTGTTCAGAGAATGGAGCTTCTTGTGTTGTCTACACTCCAATGGAGGATGAACCCTGTCACCCCAATTTCCTTCTTTGAACACATTGTTAGAAGGATTGGTTTGCATTGGGAGTTCTTATGGAGGTGCCAGCGTGTTCTTCTTTCTGTCATTCCCAATTCAAGGTTCATGGGTTATCTCCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAACCGTTAAATGCAATGGAATACATAAATCAACTCATGGGGTTACTCAAGACTAGTGAGGAACAAGTGAATGAGTGCTACAAACACATAGTGAAACAACTGGTTTTGAATCATGAAGGCATTTACAATGTTTGCCAAAAACGCAAACGGATATCCGAACCAAGTAGCCCCGGGGGTGTAATTGATGCATCATTCAGTTGTGACAGCTCAAATGATTCATGGACAGCAGCATCTTTGATCTCTCCTTCACTATCAATGGAGCCAATGTTTAAGAGGAGCAGAGCTCCGGACCAGCAGATGCGATTCGCCACAGTAAATCGAGTGTCTATCAATGTTATAGATAGTCCTCCTTAA 1131 0.4403 MKQTTNNATNTNTLSALNMNMPHTQEDEEEEEEEEEEEEDDDSPSFFDALLCEEEKNILDDDDDNHQSSLLMDNREHDHILSLLSKETHTHTIHAFLEAPRNDAVSWISKVSCFYGFTPLTTVLAVNYFDRFVTSLTFQRDKPWMTQLTALACLSLAAKMEEIHVPLLLDLQVEEPKFLFEAKTVQRMELLVLSTLQWRMNPVTPISFFEHIVRRIGLHWEFLWRCQRVLLSVIPNSRFMGYLPSTLAAATMIHVIKEIEPLNAMEYINQLMGLLKTSEEQVNECYKHIVKQLVLNHEGIYNVCQKRKRISEPSSPGGVIDASFSCDSSNDSWTAASLISPSLSMEPMFKRSRAPDQQMRFATVNRVSINVIDSPP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0664 376 Pfam Cyclin, N-terminal domain 99 201 IPR006671 -
Amo05g0664 376 CDD CYCLIN 101 193 IPR013763 -
Amo05g0664 376 SMART Cyclin_C_2 203 316 IPR004367 -
Amo05g0664 376 MobiDBLite consensus disorder prediction 1 45 - -
Amo05g0664 376 Gene3D - 202 289 - -
Amo05g0664 376 Gene3D - 98 201 - -
Amo05g0664 376 MobiDBLite consensus disorder prediction 25 45 - -
Amo05g0664 376 Pfam Cyclin, C-terminal domain 203 301 IPR004367 -
Amo05g0664 376 SUPERFAMILY Cyclin-like 73 201 IPR036915 -
Amo05g0664 376 SMART cyclin_7 106 194 IPR013763 -
Amo05g0664 376 MobiDBLite consensus disorder prediction 1 22 - -
Amo05g0664 376 PANTHER CYCLIN-D3-2 42 359 - -
Amo05g0664 376 PANTHER CYCLINS 42 359 IPR039361 -
Amo05g0664 376 SUPERFAMILY Cyclin-like 204 299 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0664 Amo-Chr5 7861846 7863362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0664 33 366 Core Cell Cycle Gene Families AT5G67260 47.541 6.55e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0664 K14505 - gmx:100785030 433.335