Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0649 ATGGAAATTCTTCATCAGCACCATAAATTTCATGCATCTGTTTGTGTAGTCCTGTTTCTTCTTCTGCAGTTCCAATCATTGGCCTTCACAGTCCCAGATAATTTCTTCATCAATTGTGGCTCGGATACCGATGTTACAGACAACAATACTGGTCGAATTTTCATTGGAGAAAGAGAAACAGAAATGGAAGCATCTTCTTCTGTTGGTTTCATCTTCCCAAAACATGGTAGCACCAGCGAGAAAGAGAGAAACCATTCACCAACACCTCCTCTGTATCAAACAGCAAGGCTTTTCCATGCTGAATCTGAATACAAGTTCAGAATTGAAAAGCATGGGTATCATCTTCTGCGCCTCCATTTCTTTGCTTTCTCTTCTTCGGAAGGTAACCTCTCCTCTTCTCTCTTCAATGTCTCTGTTCCCGGCTTCTTCCTTTTGAACAATTTCAATCCTCAATACAACAAAACCTTAATAGAGGAGTTCTTTTTGAGCATCAACACCAACAACTTCCGAATCACTTTCTCTCCTATTCATCCAAATCCTGCATTTCTAAATGCGATAGAACTCTTCCTTCTCCCCAATACTTTCATCCCAAAAGGAAGATTTTATGACCACAACAGCATGGTGTTCCATACGAGTTACAGGCTCAACGTTGGAGGCTCTGATATCAACATGGTGAATGACTCGTTGTGGAGAAACTGGCAAATTGATGATCATCCTTCTGCTGGACACAAATTTCAAAATACTAGTCCAATTCACGAAGGAAACTATGCTACTCTTGCCCCAAGTCTTGTTTACCAGAGCGCAAGAGTGATGAATAGTTCAAAGAATCACTCAAAACTTTCCAATATAACATGGCAACTTGATGTTAAGAAAAATGCTAAGTATCTTGTTCAGCTTGATTTCTGTCATATTATTGGAACTCCGGTTCTGAAAAATTCACACTTCAATGTTTACTTCGATAATAACTTGAGTCACCGGATCACTCCTTATGATCACTTCAACAAAACTTGTGTTCCTTTTCGTTTGGAATCTGTGGTTGATTCGGATGACTCTGGAGTTTTCAAAATCAGCATAGGACCTGCCCAGAATTCTCCACATAAATATGCTTATCTGAATGGCCTGGAACTAATGGAAATCGTTGAGAAAACAAGTCCAGGTCCTATGCCAGAAGTAAAACAGAATCATCCTTCGCATTCTCATTCCCATTGGTATTGCCATTTGCTTGTGCATTTGAAACTGTTGGCAATTCTCGGAGCTGTGGCTTTGGTTTCAGTTATAGCAGTTGTGTTCTTTGTGTGTCTGAAACCCAAGAAACCAAAGCATGATCAAAGTGTTGATTGGTTGCCAATGGAGAAAAAGAGAGGAGGAGGAAGCTCACACTCTCATAGCAGATATGGTAGCAGCCATGGCTCATCATCATCATCATCTTCACGTTCACATGTCCCAAACTTAAACAAGATCCCTTTCGATGAACTCCAAGTTGCTACCAACAACTTCGACCAGAATTGGGTAATTGGAATGGGTTGTTTTGGAATTGTATACAAAGGACTTCTCAACAATGGACTGAGGGTGGCAGTGAAAAGAAGCGAACCAGGGTTGCTACAACAACAAGACCTCTTGGATTTGGAAGCGGAGATCAATATTCTGTTGAGAATTCGCCATCGCCACCTTGTTTCCTTGATCGGATATTGCGACGAGAAGTCAGAGATGATCCTTGTTTATGAGTACATGGAGAAAGGGACACTGAGGGATCATTTATACAGTTCCAAGTTGTGTTGGATTCAGAGGCTTGAGATTTGCATTGGAGCCGCGAGAGGACTGAATTATCTTCACAAAGGTTCTTCCTGCAGAGGAATCAGCAATGTTCATAGCCATGTGAAATGTAGTAACATATTGTTAGATGAGAATAATGTGGCTAAGTTTTCTGATTTTGGGCTTTCAAGAAAAGTAGGCCCTTTTGATGAGAACATGAAATGTGATGTGTATTCCTTTGGAGTAGTACTTGTTGAGGTGGTGTGTGGAAGGGTGGCTATGGATGCAAACTACTTGGCTGCTGAATGGGGAAGCATTTGCAAGAAGAAAGGGAGATTGGAAGAAATAGTTGATCCTTGCATAAAGTGTGAAATAGATGGAGAGTCTCTCACAAAGTTTGGTGAGACTGTAGACAAGTGTTTGAGAAAGAAGGCTTTTGATAGGCCTTGTATGGGTGATGTCTTGTGGGACTTGGAGTATGCATTGCAGCTTCAGAGAGGGGCAATTCAGTCAAATCCACATAGTAATACTATTGCTTCTGCTAAGACTCAAGAATTGGCCATTCTCAAGCATGATCAATTGAATTCACCAGTCAACTATTATTCTGGTTTGTAA 2367 0.4085 MEILHQHHKFHASVCVVLFLLLQFQSLAFTVPDNFFINCGSDTDVTDNNTGRIFIGERETEMEASSSVGFIFPKHGSTSEKERNHSPTPPLYQTARLFHAESEYKFRIEKHGYHLLRLHFFAFSSSEGNLSSSLFNVSVPGFFLLNNFNPQYNKTLIEEFFLSINTNNFRITFSPIHPNPAFLNAIELFLLPNTFIPKGRFYDHNSMVFHTSYRLNVGGSDINMVNDSLWRNWQIDDHPSAGHKFQNTSPIHEGNYATLAPSLVYQSARVMNSSKNHSKLSNITWQLDVKKNAKYLVQLDFCHIIGTPVLKNSHFNVYFDNNLSHRITPYDHFNKTCVPFRLESVVDSDDSGVFKISIGPAQNSPHKYAYLNGLELMEIVEKTSPGPMPEVKQNHPSHSHSHWYCHLLVHLKLLAILGAVALVSVIAVVFFVCLKPKKPKHDQSVDWLPMEKKRGGGSSHSHSRYGSSHGSSSSSSSRSHVPNLNKIPFDELQVATNNFDQNWVIGMGCFGIVYKGLLNNGLRVAVKRSEPGLLQQQDLLDLEAEINILLRIRHRHLVSLIGYCDEKSEMILVYEYMEKGTLRDHLYSSKLCWIQRLEICIGAARGLNYLHKGSSCRGISNVHSHVKCSNILLDENNVAKFSDFGLSRKVGPFDENMKCDVYSFGVVLVEVVCGRVAMDANYLAAEWGSICKKKGRLEEIVDPCIKCEIDGESLTKFGETVDKCLRKKAFDRPCMGDVLWDLEYALQLQRGAIQSNPHSNTIASAKTQELAILKHDQLNSPVNYYSGL* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0649 788 Gene3D Transferase(Phosphotransferase) domain 1 577 656 - -
Amo05g0649 788 MobiDBLite consensus disorder prediction 440 458 - -
Amo05g0649 788 MobiDBLite consensus disorder prediction 460 481 - -
Amo05g0649 788 SUPERFAMILY Protein kinase-like (PK-like) 467 742 IPR011009 -
Amo05g0649 788 Gene3D - 34 190 - -
Amo05g0649 788 Gene3D - 209 379 - -
Amo05g0649 788 Pfam Protein tyrosine and serine/threonine kinase 504 650 IPR001245 GO:0004672|GO:0006468
Amo05g0649 788 PANTHER BNAC03G27170D PROTEIN 27 768 - -
Amo05g0649 788 Pfam Malectin-like domain 37 378 IPR024788 -
Amo05g0649 788 Gene3D Phosphorylase Kinase; domain 1 460 576 - -
Amo05g0649 788 PANTHER OS07G0166700 PROTEIN 27 768 IPR045272 GO:0004714|GO:0006468
Amo05g0649 788 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Amo05g0649 788 ProSiteProfiles Protein kinase domain profile. 499 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0649 788 MobiDBLite consensus disorder prediction 440 481 - -
Amo05g0649 788 Gene3D Transferase(Phosphotransferase) domain 1 657 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0649 Amo-Chr5 7689578 7692195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0649 14 749 Receptor kinase-like Gene Family AT2G23200 37.453 8.74e-145 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo05g0649 Malectin_like 1.7e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0649 - - aip:107642740 1503.03