Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0647 ATGATGGAACTTTCTTATTATAACTCTCTTCTTCTGTTCGTTGTTTTCATCACTTCTTACATGCTATTCACAAAGAGATTCAAAAACCTACCACCATCTCCACCGTCTCTTCCTCTAATCGGCAACCTCCACCTCCTGAAACCACCCGTCTTCCGCACCTTCTACGCCTTATCACAAAAATACGGTCCCATTTTCTCGTTCCGCTTCGGTTCCCAACTCTCCGTGGTCGTTTCCTCCGCCTCCTTGGCCGAAGAATGTTTTACCAAAAACGACATCGTCCTCGCGAACCGTTTCCGTTCCGCCAAGACCAAGCACCTAACCTACAACAACACCGTGGTGATAACTTCGCCGTACGGCGACCACTGGCGCAACCTCCGCCGCATCTGCTCCCTGGAGATCCTCTCCACTCAGCGTCTCAACTCTTTTACGGGAATCCGAAGGGACGAAACGGCGAGGTTGGTTCGGAGCTTGAGTGAGGGGTTATGCGAGGGCTTCACGAGAGTTGAAGTGAGATCGAAATTGACGGAGCTAACGTTCAACACGATCATGAGAATGGTGAGTGGGAAACGGTACTACGGGGAAGAATGCGATGGTACGAGTGCGGAGGAGGCGAAGAAGTTCAGGGATGTGATGGATGATATGGCGAAGTTCGGATTGAGTTCGAATCTTGGGGATTTTGTGCCTGTGGTTCGGTTGTTCGATTTCAGTGGTGATAATAGAAAACTCCAAATAATTGGTGAGAAGATGGATGCTCTGTTCCAAGGGCTGATCGATGAGCATAGAAGCAAGAAGGAAAGTTCAAACACCATGATAGATCACTTGCTCTCCTTTCAAGAATCTCAACCAGAGTATTACACCGATCAAATTATCAAAGGGCTTATCATGGCCATGATGGTAGCTGGAACAGAGACTTCGGCTATAACAATAGAATGGGCATTGTCGAATCTGTTAAACCATCCACAAGTGTTGGAGAAAGCAAGGATGGAGTTGGACACTCATGTTGGACAAGACAGGCTCTTAGAAGAAGACGACCTTACCAAATTAACCTACCTTCATAACATAATCTCTGAGACTTTGAGACTCTACCCTGCAGCGCCAATGCTATTGCCTCATCTCTCCGCTCAGGACTGCACCCTTGGAGGCTACCATGTGCCACGTAATACTCTGGTTTTTGTCAATGCGTGGGCCATCCATCGGGACCCGGACTTGTGGGCCCAATCTTCAACTTTCATGCCTCAAAGATTTGAGAATGCTGACGCCAACAATAACCCTTATGGCTTCATGCCGTTTGGGATGGGGAGGAGGGCGTGTCCTGGCTCCGGCCTGGCCCAGAGAACCGTGGGCTTGACTTTGGGCTCTTTGATACAATGCTTTGATTGGAACCGGATTGGCGAGGAAGAAGTTGACATGACAGAAGGACACGGAACTCTCATGTCAAAGGCTATTCCATTGGAGGCCCAATGTAAAGCCCGTCCAATCATCACCAAGATTTTCTCTCAATGA 1503 0.4857 MMELSYYNSLLLFVVFITSYMLFTKRFKNLPPSPPSLPLIGNLHLLKPPVFRTFYALSQKYGPIFSFRFGSQLSVVVSSASLAEECFTKNDIVLANRFRSAKTKHLTYNNTVVITSPYGDHWRNLRRICSLEILSTQRLNSFTGIRRDETARLVRSLSEGLCEGFTRVEVRSKLTELTFNTIMRMVSGKRYYGEECDGTSAEEAKKFRDVMDDMAKFGLSSNLGDFVPVVRLFDFSGDNRKLQIIGEKMDALFQGLIDEHRSKKESSNTMIDHLLSFQESQPEYYTDQIIKGLIMAMMVAGTETSAITIEWALSNLLNHPQVLEKARMELDTHVGQDRLLEEDDLTKLTYLHNIISETLRLYPAAPMLLPHLSAQDCTLGGYHVPRNTLVFVNAWAIHRDPDLWAQSSTFMPQRFENADANNNPYGFMPFGMGRRACPGSGLAQRTVGLTLGSLIQCFDWNRIGEEEVDMTEGHGTLMSKAIPLEAQCKARPIITKIFSQ* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0647 500 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 496 - -
Amo05g0647 500 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Amo05g0647 500 Pfam Cytochrome P450 31 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g0647 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 496 - -
Amo05g0647 500 SUPERFAMILY Cytochrome P450 31 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0647 Amo-Chr5 7683237 7685045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0647 11 500 Cytochrome P450 AT4G37370 55.354 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0647 K13260 - gmx:100804509 664.84