Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0630 ATGTTGGAGCTCTGTCGAAAACCGTTGATGTGCTTCTTCTCATGTGGACTAGGAGGAGGCAACTATGACGATGAGCTTCTATGGGACTTAGAGTTGAAGCCACACACCGCAGGTGAATATTCAATTGCTGTTGTTCAAGCCAATTCTTCTTTGGAAGACCAAGCACAGGTGTTTACTTCTCCCTTTGCAACTCTTGTTGGTGTTTATGATGGCCATGGTGGACCTGAAGCTTCTCGTTTCATCACCAACCATCTCTTCTCCTTCATTCACATGTTCTCTGCAGAGGATGGTGGGTTATCGGAGCAAGTGATAAAGAAAGCTTTCAGTGCAACTGAAGAGGAGTTCTTGCGTATGGTGAAGCAATCATGGATTTCGCAGCCACACATTGCTTCGGTGGGATCGTGTTGTATTCTTGGAGCAATTTCAAACGATGTTCTCTATGTCGCTAACCTTGGAGACTCGAGGGCAGTTCTCGGTCGCAAAGCATTCGGAGGAAACGAGGTTAGTTGCGGTCATAATGTGGTGGCAGAGCGTTTGTCCACGGATCATAATGTTGGAGTGGAGGAGGTGAGAAAGGAGGTTGAGGCTCTTCACCCTGATGATGATTATGTTGTGGTTAATGCTAATGGAGTTTGGAGAATCAAGGGGATTATTCAGGTCTCAAGATCAATTGGAGATGTTTATCTAAAGAAGCCAGAGTTCGACAACAAGTCTATAATGTTCCAGCAATGTGTGTCCCCGGTACCTTTAAAGAGAGCCGTGATGACGGCGGAGCCATCAATATTAACTCGAAAGTTGAAGGCGGAGGATTTGTTTCTGATCTTCGCATCGGACGGACTTTGGGAGCAATTAACGGACAAAGAAGCCGTTGAAATCGTGTCTAGAAGTCCAAGAAAAGGGATAGCAAAAAGATTGGTGAGAGCTGCACTAGAAGCTGTTGCAAAGAAAAAAGAAATGAGATATGAGGATTTAAAGAAAATTGAGAAAGGTGTAAGGCGCCATTTCCATGATGATATTACAGTGATTGTTATATACCTTGATCATTCACAAAATTCTGTGAATGGTAGTAGGCCAAGACATCAAGGAATCTATGATTCTGTTAATGCTCCTGTAGATATCTACTCTATTAATGCAGATAGGTAA 1143 0.4348 MLELCRKPLMCFFSCGLGGGNYDDELLWDLELKPHTAGEYSIAVVQANSSLEDQAQVFTSPFATLVGVYDGHGGPEASRFITNHLFSFIHMFSAEDGGLSEQVIKKAFSATEEEFLRMVKQSWISQPHIASVGSCCILGAISNDVLYVANLGDSRAVLGRKAFGGNEVSCGHNVVAERLSTDHNVGVEEVRKEVEALHPDDDYVVVNANGVWRIKGIIQVSRSIGDVYLKKPEFDNKSIMFQQCVSPVPLKRAVMTAEPSILTRKLKAEDLFLIFASDGLWEQLTDKEAVEIVSRSPRKGIAKRLVRAALEAVAKKKEMRYEDLKKIEKGVRRHFHDDITVIVIYLDHSQNSVNGSRPRHQGIYDSVNAPVDIYSINADR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0630 380 CDD PP2Cc 46 346 IPR001932 -
Amo05g0630 380 SMART PP2C_4 31 344 IPR001932 -
Amo05g0630 380 ProSiteProfiles PPM-type phosphatase domain profile. 39 346 IPR001932 -
Amo05g0630 380 PANTHER ALPHABET, ISOFORM E-RELATED 3 379 - -
Amo05g0630 380 Coils Coil 307 327 - -
Amo05g0630 380 Pfam Protein phosphatase 2C 65 312 IPR001932 -
Amo05g0630 380 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Amo05g0630 380 SUPERFAMILY PP2C-like 45 348 IPR036457 -
Amo05g0630 380 Gene3D - 30 354 IPR036457 -
Amo05g0630 380 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0630 Amo-Chr5 7408419 7410871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0630 24 355 PP2C-type Phosphatase Gene Family AT3G51370 53.959 4.42e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0630 - K01102 gmx:100802394 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0630 05 7408419 7410871 Amo19g4275 19 159442870 159444708 PCT