Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0613 ATGCAATATACACTCACTACCTTCTCTAACTCTTCAATGACGCAATTCACCACAAAAATACCACCACCTTTGCACCAATACAACTTTTCATTTTCAAATCCTAATAATAATAATAATAATATTATGAACAAGAACCAACAAATTCCTAGGACTAGGCCCTGGCCTGCTTTCCCTACACCTAAGTCACTACCTACTTCCACCACCTTCGGTGACGCCACTTGCATGGAACAGTTACTTGTTCACTGCGCCAACGCTATTGAAACCAACGACGTAACCCTCGCTCAGCAGATTCTCTGGGTTCTAAACAACATAGCTCCACCTGACGGCGATTCCAATCAGCGACTCGCCGGAAGCTTCCTCAGAGCCCTAACCGCACGCGCCGCGAATACTGGAAGCTGCAAGATGCTCGCCGCTGTAGCTGACGCCGCTGCTAACCGTAACAGCCTCGCCATCGAAACGCACAGATTCTCTGTCATCGAGCTGGCAAACTTCGTTGACCTCACTCCATGGCACAGGTTCGGGTTCACCGCCGCCAACGCCGCCATTTTAGAAGCCACGGAAGGGTTCTCGGTGATCCACATCGTGGATTTGAGCTTGACGCACTGCATGCAGATCCCGACGCTGATCGACGCCATCGCTGGCCGCCACGAGGTGCCTCCTGTAATCAAGCTCACGGTTCCCGGTGCCGCCTTCAGAGAAGGTAACATCAATATCCCTCCASTACTCGATCTTTCTTACGAGGAATTAGGCGCGAAGTTGGTCAACTTCGCTAGGTCGAAGAACGTGGTCATGGAATTCAGCGTTGTSTCTTCGAGTTACGCTGATGGATTCGCCTCTTTGATCGAACACCTGAGAGTGCAACATATAGTTTCCGTTGCAGAAGGTCATCGTCCAAACGAAGCTTTGGTTATTAACTGTCACATGATGCTTCATTACATTCCCGATGAAACTGCACTAGTTCATCATCATCATGAAACAGATTCGAATTTAAAYCCTTTTATTGTTCATGATTACTCTTCTTCTTCGTCATCTCCTTCATCTTCATCGTCRTCATTGCGGTCAATGTTTCTTAAGGCGGTTCGGAGTTTGGAACCTACAATTATGGTTTTGGTAGATGAGGACGTGGATTTGATATCAAATAACTTGGTGTGTAGGCTSAGGTCTGCGTTCAATTATCTGTGGATACCGTACGACACGGTGGACACGTTCCTTCCTCGAGGCAGCAAGCAAAGGCAGTGGTATGAAGCTGACATATGTTGGAAGATTGAGAACGTGATAGCGCATGAAGGGGCTGAGAGGGTGGAGAGGGTTGAGCCCAAGAGCAAGTGGGAGCAAAGGATGAGRAATGCGAGCTTCCATGGGATTGGATTCAGYGAWGAATCGATTTCKGAGGTGAAGGGGATGCTGGATGAACATGCTGCTGGTTGGGGTGTTAAGAAGGAAGATGACAATCTTCTTCTCACYTGGAAAGGCCATAATGTTATCTTTGCTTCAGCTTGGTTACCTGCTTAG 1512 0.4769 MQYTLTTFSNSSMTQFTTKIPPPLHQYNFSFSNPNNNNNNIMNKNQQIPRTRPWPAFPTPKSLPTSTTFGDATCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLAGSFLRALTARAANTGSCKMLAAVADAAANRNSLAIETHRFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIAGRHEVPPVIKLTVPGAAFREGNINIPPXLDLSYEELGAKLVNFARSKNVVMEFSVVSSSYADGFASLIEHLRVQHIVSVAEGHRPNEALVINCHMMLHYIPDETALVHHHHETDSNLNPFIVHDYSSSSSSPSSSSSSLRSMFLKAVRSLEPTIMVLVDEDVDLISNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGAERVERVEPKSKWEQRMRNASFHGIGFSXESISEVKGMLDEHAAGWGVKKEDDNLLLTWKGHNVIFASAWLPA* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0613 503 MobiDBLite consensus disorder prediction 30 62 - -
Amo05g0613 503 MobiDBLite consensus disorder prediction 30 52 - -
Amo05g0613 503 PANTHER SCARECROW-LIKE PROTEIN 32 47 501 - -
Amo05g0613 503 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 501 IPR005202 -
Amo05g0613 503 Pfam GRAS domain family 75 500 IPR005202 -
Amo05g0613 503 ProSiteProfiles GRAS family profile. 66 501 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0613 Amo-Chr5 7257726 7260216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0613 42 502 GRAS Transcription Factor Family AT3G49950 54.526 9.49e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo05g0613 GRAS 2e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0613 - - adu:107487668 930.628