Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0611 ATGAGTTGCAACGGGTGCCGAGTCCTTAGGAAGGGTTGCAGCGAGTCATGCATCTTAAGGCCATGCCTTCAGTGGATCGAAACCGCCGAGGCCCAAGGCCACGCCACCGTCTTCGTGGCCAAATTCTTTGGTCGCGCCGGCCTCATGTCCTTCATTTCCAATGTCCCTGAGCCCCAAAGACCCGCTCTTTTTCAGTCTCTACTTTTCGAAGCATGTGGGCGAACGGTTAACCCGGTTAACGGTGCCGTTGGACTACTGTGGACTGGAAACTGGCACGTGTGCCAGGCCGCCGTTGAAACGGTGCTCCGAGGAGGCTCCCTCAGGCCTATGCCGGAGCTACTCGGTCTCGACGCGCCTGTTCCTGTCGCTGTTGACGCCGGCTCCGAGGGGGAAGTCACGTGCGCTGACGCGCGGAAGCTCCGAGACCCGAACCCGAGTCCGAGCATAAGGTTCACGAGCTCCCGATCTGGTAAAGACAGTTCCGGCTGGAAGCGGAAGCGATCGGAGGAGTCGATGATGACGACGGCGGACCTTAACCTTCGGCTGACGCCGAGTTCCGTGCATAGCGGTTGCCGGCAGGAAATTCGGCGGCCGGGAACGCCGTCGATGAATTCGGAGGAATCGGTGACGACGATGGCGTGCTTGGATAGCGGACTCGGAGATAACTACGCTCACGGCGGAGACCGGAAAGTCCTCAACCTTTTCATCTGA 711 0.5963 MSCNGCRVLRKGCSESCILRPCLQWIETAEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGSLRPMPELLGLDAPVPVAVDAGSEGEVTCADARKLRDPNPSPSIRFTSSRSGKDSSGWKRKRSEESMMTTADLNLRLTPSSVHSGCRQEIRRPGTPSMNSEESVTTMACLDSGLGDNYAHGGDRKVLNLFI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0611 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 236 - -
Amo05g0611 236 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Amo05g0611 236 MobiDBLite consensus disorder prediction 135 172 - -
Amo05g0611 236 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Amo05g0611 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 236 - -
Amo05g0611 236 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0611 Amo-Chr5 7195416 7197107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0611 1 236 AS2 family AT4G37540 58.167 4.03e-84 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo05g0611 LOB 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0611 - - gmx:100816189 383.259