Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0605 ATGGCCATAAGGCCCTTCCAATTCCAATCTTCCACCTTCTCCCGCGACACTTTCCTTTCTCTTTTCCGCACTTACCACCATCTTCATCTTCCTTCTTCTTCTTCCTCCTCTTTCCCCACTCTCCCCTCCATTTTCCTCCTCCGCAGCTTCGCCGCCTCCGCGCCATCTTCATTCTCTCGCCGCAACCGCTCTCATCCTCCTCCTCCTCCACCACCACCACCACCTGACACCCTGGCGCAGAAGATTGGAAAGTCCACTCGCCGCCCCGGCGCCACCTCCAAGGCCAGGATTTATGCCGATATCAACGTCGTCCGTCCCAAGGAATATTGGGACTATGAAAATCTCACCGTCCAGTGGGGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTCGAGGGCGTTCACTCCACCGATAATGAAAAATGCATCATCAAGATCCTCAAACCCGTCAAGAAGAAAAAGATAAAGAGGGAGATCAAAATATTGCAAAATCTYTGTGGAGGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTACCCCACCCTGTCAGATTATGATATCCGATATTATATCTATGAACTTCTAAAGGCACTGGATTATTGCCACTCTCAAGGAATCATGCATCGGGATGTAAAGCCGCATAATGTAATGATTGATCATGAGCAGCGGAAGCTTCGCCTAATAGATTGGGGGCTTGCAGAGTTTTATCATCCTGGGAAAGAATATAATGTCCGCGTTGCCTCCAGATATTTCAAAGGTCCTGAACTTCTTGTTGATCTTCAGGACTATGATTACTCTCTTGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATTTTTCGTAAGGAGCCATTCTTTTACGGACATGATAACTATGATCAACTAGCCAAAATAGTTAAGGTACTTGGAACTGATGAATTAAATGCGTATCTGAACAAGTACCGCATAGAGTTGGACCCAAATCTAGCAGCACTTGTTGGGAGGTATGCTCGAAAGCCATGGTCAAAGTTTATTAGTGTAGAAAACCAACACTTGGCAGTTCCTGAGGCTATTGACTTTGTTGACAAGTTACTGCGGTATGATCACCAAGATCGACCCACTGCAAAAGAAGCCATGGCCCACCCTTACTTCAATCCAGTTAGAAATGCTGAAAGCAGCAGAACTCATACACATTGA 1275 0.4557 MAIRPFQFQSSTFSRDTFLSLFRTYHHLHLPSSSSSSFPTLPSIFLLRSFAASAPSSFSRRNRSHPPPPPPPPPPDTLAQKIGKSTRRPGATSKARIYADINVVRPKEYWDYENLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHSTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLAKIVKVLGTDELNAYLNKYRIELDPNLAALVGRYARKPWSKFISVENQHLAVPEAIDFVDKLLRYDHQDRPTAKEAMAHPYFNPVRNAESSRTHTH* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0605 424 Gene3D Transferase(Phosphotransferase) domain 1 202 410 - -
Amo05g0605 424 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Amo05g0605 424 MobiDBLite consensus disorder prediction 62 78 - -
Amo05g0605 424 Pfam Protein kinase domain 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0605 424 PANTHER CASEIN KINASE II SUBUNIT ALPHA 76 416 IPR045216 GO:0004674|GO:0006468
Amo05g0605 424 Gene3D Phosphorylase Kinase; domain 1 125 201 - -
Amo05g0605 424 SMART serkin_6 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0605 424 SUPERFAMILY Protein kinase-like (PK-like) 99 414 IPR011009 -
Amo05g0605 424 MobiDBLite consensus disorder prediction 404 424 - -
Amo05g0605 424 PANTHER BNAA04G13490D PROTEIN 76 416 - -
Amo05g0605 424 MobiDBLite consensus disorder prediction 57 91 - -
Amo05g0605 424 ProSiteProfiles Protein kinase domain profile. 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0605 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Amo05g0605 424 CDD STKc_CK2_alpha 106 410 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0605 Amo-Chr5 7103366 7108175 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0605 123 411 Core Cell Cycle Gene Families AT1G76540 30.696 3.67e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Amo05g0605 Pkinase 1.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0605 K03097 - gmx:100776388 663.299