Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0596 ATGGCCATAAGGCCCTTCCAATTCCAATCTTCCACCTTCTCCCGCGATACTTTCCTTTCTCTTTTCCGCACTTACCACCATCTTCATCTTCCTTCTTCTTCTTCCTCCTCTTTCCCCACTCTCCCCTCCATTCTCCTCCTCCGCAGCTTCGCCGCCTCCGCGCCATCTTCATTCTCTCGCCGCAACCGCTCTCATCCTCCTCCTCCTCCACCACCACCACCTGACACCCTGGCGCAGAAGATTGGAAAGTCCACTCGCCGCCCCAGCGCCACCTCCAAGGCCAGGATTTATGCCGATATCAACGTCGTCCGTCCCAAGGAATATTGGGACTATGAAAATCTCACCGTCCAGTGGGGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTCGAGGGCGTTCACTCCACCAATAATGAAAAATGCATCATCAAGATCCTCAAACCCGTCAAGAAGAAAAAGATAAAGAGGGAGATCAAAATATTGCAAAATCTTTGTGGAGGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCCACCCCACCCTGTCAGATTATGATATCCGATATTATATCTATGAACTTCTAAAGGCACTGGATTATTGCCACTCTCAAGGAATCATGCATCGGGATGTAAAGCCGCATAATGTAATGATTGATCATGAGCAGCGGAAGCTTCGCCTAATAGATTGGGGGCTTGCAGAGTTTTATCATCCTGGGAAAGAATATAATGTCCGCGTTGCCTCCAGATATTTCAAAGGTCCTGAACTTCTTGTTGATCTTCAGGACTATGATTACTCTCTTGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATTTTTCGTAAGGAGCCATTCTTTTACGGACATGATAACTATGATCAACTAGCCAAAATAGTTAAGGTTGGTACTTGGAACTGA 1014 0.4596 MAIRPFQFQSSTFSRDTFLSLFRTYHHLHLPSSSSSSFPTLPSILLLRSFAASAPSSFSRRNRSHPPPPPPPPPDTLAQKIGKSTRRPSATSKARIYADINVVRPKEYWDYENLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHSTNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLHPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLAKIVKVGTWN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0596 337 Gene3D Transferase(Phosphotransferase) domain 1 201 333 - -
Amo05g0596 337 CDD STKc_CK2_alpha 105 335 IPR045216 GO:0004674|GO:0006468
Amo05g0596 337 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Amo05g0596 337 SUPERFAMILY Protein kinase-like (PK-like) 95 333 IPR011009 -
Amo05g0596 337 MobiDBLite consensus disorder prediction 57 90 - -
Amo05g0596 337 SMART serkin_6 124 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0596 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Amo05g0596 337 Pfam Protein kinase domain 124 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0596 337 PANTHER BNAA04G13490D PROTEIN 75 333 - -
Amo05g0596 337 MobiDBLite consensus disorder prediction 62 77 - -
Amo05g0596 337 ProSiteProfiles Protein kinase domain profile. 124 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0596 337 PANTHER CASEIN KINASE II SUBUNIT ALPHA 75 333 IPR045216 GO:0004674|GO:0006468
Amo05g0596 337 Gene3D Phosphorylase Kinase; domain 1 124 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0596 Amo-Chr5 6917841 6922485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0596 122 333 Core Cell Cycle Gene Families AT3G48750 34.081 1.42e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Amo05g0596 Pkinase 9.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0596 K03097 - gmx:100776388 499.204