Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0595 ATGGGTGAGGAGTTTCATCATGGTGTTGTTATGAGAGAGTATGATCCTAATAGAGACAGAGAAAGAGTAGAAGAAGTAGAGAGAATATGTGAGGTTGGACCCAGTGGAAAGCTTTCTATCTTCACCGACCTCCTCGGTGACCCTATCTGCAGGGTCCGCCACTCACCTTCTTTCCTCATGCTGGTGGCGGAGATTGGAGATGAGATAGTGGGAATGATAAGGGGTTGCATCAAAACCATCACGTGCGGAAAGAAGCCCTCCAGAAACACCAAACACAGCGACACTAGTAACACTGGTAACAGTAACAGACATCTCCCTGTTTATGCTAAAGTCGCCTACATATTAGGCCTTCGCGTTTCCCCCTCTCACCGGAGAATAGGAATAGGGTTGAAGCTGGTGCATCGAATGGAGGCATGGTTCAGAGATAATGGCGCAGAGTATTCCTACATGGCAACGGAAAACGACAATTTAGCATCCGTGAAACTCTTCACTGACAAATGCGGTTACACAAAGTTCCGTACTCCTTCCATCCTTGTCAACCCCGTTTTCGCCCACCGTCTCACCCTCTCCCCAAAGGTCAAAATCATCCACCTTACCCCCTCCCAAGCGGAAGCCATCTACCGCCGCCGATTCGCCACCACCGAGTTCTTCCCCCCTGACATCGACGCCGTCCTCAACAACAAACTCTCAGTCGGGACCTTCCTCGCCGTTCCCGACGGCGCCACCTGGCAAGGCACGGATCACTTCCTATCCGACCCACCCAAGTCGTGGGCCATACTTAGCATATGGAACTCTAAGGAACTCTTCACGCTCCAAGTGCGTGGTGCGTCGCGCGTGAAACGCACGCTTGCGAAGACGACTCGCGTGGTTGACAAGGCTTTTCCCTTTTTACGGTTACCTTCATTTCCGGACTTCTTCAAGCCGTTCGGGTTCCACTTTGTGTACGGAATTGGAGGAGAAGGTCCCGAGGCGGTTAAGATGGTTAAGACTTTGTGCGATTTTGCGCACAACGTGGCCAAAGAACGTGATTGCGGCGCGGTAGTTACCGAAGTGTCTGGTCAAGAACCGTTGCGGTTTGGGATACCGCACTGGAAGATGCTATCGTGTCCTGAAGATCTATGGTGCATTAAGAGGCTCGGTGAGGATTACAGCGACGGTTCCGTTGGTGACTGGACCAAATCTCCACCTGGAATTTCCATTTTTGTTGATCCAAGAGAAGTCTGA 1224 0.5131 MGEEFHHGVVMREYDPNRDRERVEEVERICEVGPSGKLSIFTDLLGDPICRVRHSPSFLMLVAEIGDEIVGMIRGCIKTITCGKKPSRNTKHSDTSNTGNSNRHLPVYAKVAYILGLRVSPSHRRIGIGLKLVHRMEAWFRDNGAEYSYMATENDNLASVKLFTDKCGYTKFRTPSILVNPVFAHRLTLSPKVKIIHLTPSQAEAIYRRRFATTEFFPPDIDAVLNNKLSVGTFLAVPDGATWQGTDHFLSDPPKSWAILSIWNSKELFTLQVRGASRVKRTLAKTTRVVDKAFPFLRLPSFPDFFKPFGFHFVYGIGGEGPEAVKMVKTLCDFAHNVAKERDCGAVVTEVSGQEPLRFGIPHWKMLSCPEDLWCIKRLGEDYSDGSVGDWTKSPPGISIFVDPREV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0595 407 CDD NAT_SF 60 147 - -
Amo05g0595 407 Gene3D - 41 175 - -
Amo05g0595 407 PANTHER N-ACETYLTRANSFERASE 9 406 - -
Amo05g0595 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 173 IPR016181 -
Amo05g0595 407 Pfam Acetyltransferase (GNAT) family 54 169 IPR000182 GO:0016407
Amo05g0595 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 190 IPR000182 GO:0016407
Amo05g0595 407 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 9 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0595 Amo-Chr5 6882597 6884464 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo05g0595 Acetyltransf_1 2e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0595 - - lang:109348839 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0595 05 6882597 6884464 Amo11g1002 11 29124024 29125643 PCT
Amo11g1002 11 29124024 29125643 Amo05g0595 05 6882597 6884464 PCT