Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0591 ATGAAATTCAATTTCAAACCACATCACTCTCTCTTCTTAATTATCATAATCTCACTTTTGTCCATATTATCCCTCGCTAAACCCCTCAATGAATCTCACATTACACGAAGAATCCTCCACCAACCACTTTTCCCCGCCGCTTCAGCGCCACCACCCTCGCCTGCTCAATTGCCACCGCCGGTGGACACTCCACCCACTCCGGACACCAACATTCCATTCTTCCATGAGTATCCGACTGGACCACCACCGGATCAGACGCAATCAGCGCCATCAACACCTTCCAACACCACCATCGCCAACCCGACGGCCACGCAGCCGACCAAGGGGACAAAGAAGGTGGCAATTGCCATCTCCGTCGGAATTGTGACGCTTGGGATGCTCTCGGCGCTGGCGTTCTTCTTGTACAAGCACAGGGCCAAGCACCATGCGGAGACACAGAAGCTCGTCGGTGGAAACTCGCAGAGGAACTTGGATGATTCGAGAGCGCCACCGCCATCGAGCTTTCTCTACATTGGGACCGTGGAGCCCACGCGCACCAATGCGAGTGAACCAATCAGGTCGCCGTATCACAAACTAAATTCCGTTAAGCGGTCGGATCGGTACCGTCCGAGCCCCGAGCTGCAGCCATTGCCGCCTCTCAGTAAGCCTCCCGACGGGAATTTCCCGCCGGCGGTGTCACCGTCTTCGTCGTCCGACGAGGAGAGCCACGACACGGTGTTTCACTCGCCGCAGAACTCGTCGGTTAGAGATGACGACGGGTACTACACGCCAGTTTCGCGACAGAGTTATCTGTCCAACGGTAACCCCGCGGCCGTGGCGCCCACGGTGAGGAAGGAAGCCAATTCTTCGACGCCGACTCCGGTTCCGTTCTCGAAGAGGACTTCACCAAAGTCGCGATTGTCTGGTCCGTCGCCGGATGTAAGACACGTCATCATACCGCCTATGAAGAAGGCTCCGCCGCCACCGGTAAAGGATGAGGAAGAGCATGTGGCTTTGGGACATTCTAGAAAGCCAAAGTTCTCAGCTCCTCCCCCAGCACCGAATTTGACGCATCTTCAGTCAACACTCACAAACACACCCCCGCACGTGATTGGGAACCCACTTAATCATCGGCCACCACCCCCACCACCACCACCTCCTCCTCCACCACCGCGCAAAACAGGGTCTCCGGGAGTAAGTGTTTCCTCATCTTCTGTATCGAGAAAGCAACAGTCTCGTTCTCCAACTGAAGGGAATCGCGAGGCTTCTATTTCTGGTGTTAGGGTGAGTAAAAGTTCAGAGCAAAATGGAAATGGAAACGGAGACGGTGAGAAAAGTGTGAGCTCTTCCGAGAGGCATGAAGCCAATGAAACGGATGGAGTAAAACCCAAGTTAAAAGCTTTGCATTGGGATAAGGTCCGTGCTTCCTCAGATCGTGTTACTGTGTGGGACCAGTTAAAATCCAGTTCCTTCCAATTGAATGAGGACATGATGGAGTCTTTATTTGGCTGTAATGCCACTAACTCTGCCCCTAAAGAACCTCCTAAGAAAACGGTTCTGCCTTCCATTGATCATGAGAACAGGGTGCTTGACCCCAAGAAGTCTCAGAACATAGCTATACTACTCAGGGCACTAAATGTCACCAGGGATGAGGTCTCCGAAGCTCTTTTAGATGGGAATCCTGAAGCTTTGGGTGCTGAGCTATTGGAAACACTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTCAAAAACTACAATGGTGACCTCTCAAAACTTGGGTCAGCGGAAAGGTTTCTTAAAGCTGTGCTTGATATCCCTTTTGCCTTTAAGAGGGTTGAAGCTATGCTATATAGGGCTAACTTTGATTCAGAAGTCAACTATCTCAGGAAGTCTTTTCAAACCCTGGAGGCAGCAAGTGAGGAATTAAGGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAGAACAGGAAACAGAATGAATGTCGGCACCAATAGAGGCGATGCCAAAGCTTTCAAACTTGAGACACTCTTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTTCACTTTGTGGTCCAGGAGATTATTAGATCTGAAGATGGAGGCGGGGAATCCGCGAATGGTAGTGTTCAGAACCAAATGGATTCCAAATTTAATGAGGACGAGTTTAAGAAGCAAGGATTACAAGTTGTGGCTGGGCTGAGTAGAGACCTTAGTAATGTTAAGAAAGCAGCAGGAATGGATTCAGATGTCTTAAGCAGCTATGTTTCGAAGCTCGAAACAGGGCTTGATAAAGTGCGACTGGTATTGAAATATGAGAAGCCAGATACGCAGGGGAATTTCTTCAACTCCACAAAGCAATTTCTGAAATATGCTGAAGAAGAAATCACGAGGATTAAAGCTGATGAGAAGAAGGCCCTGTTCCTTGTGAAAGAAGTAACAGAATACTTCCATGGGGATGCAGCAAAAGAAGAAGCCCACCCTTTCAGAATCTTTATGATTGTAAGAGACTTCCTAAATATTCTGGATTTGGTCTGCAAGGAAGTGGGAAGGATGCATGATAGAATTGTCGGCTCCGCGAGATCATTCCGCATAGCCGCAAGTGCACCATTACCTGTTCTCAACAGGTACAGTGCAAAGCAGGATACAAGCTCGGACGAGGAAAGCTCATCCCTCTAG 2688 0.4926 MKFNFKPHHSLFLIIIISLLSILSLAKPLNESHITRRILHQPLFPAASAPPPSPAQLPPPVDTPPTPDTNIPFFHEYPTGPPPDQTQSAPSTPSNTTIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHHAETQKLVGGNSQRNLDDSRAPPPSSFLYIGTVEPTRTNASEPIRSPYHKLNSVKRSDRYRPSPELQPLPPLSKPPDGNFPPAVSPSSSSDEESHDTVFHSPQNSSVRDDDGYYTPVSRQSYLSNGNPAAVAPTVRKEANSSTPTPVPFSKRTSPKSRLSGPSPDVRHVIIPPMKKAPPPPVKDEEEHVALGHSRKPKFSAPPPAPNLTHLQSTLTNTPPHVIGNPLNHRPPPPPPPPPPPPPRKTGSPGVSVSSSSVSRKQQSRSPTEGNREASISGVRVSKSSEQNGNGNGDGEKSVSSSERHEANETDGVKPKLKALHWDKVRASSDRVTVWDQLKSSSFQLNEDMMESLFGCNATNSAPKEPPKKTVLPSIDHENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEALGAELLETLVKMAPTKEEEIKLKNYNGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEVNYLRKSFQTLEAASEELRNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEDGGGESANGSVQNQMDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVSKLETGLDKVRLVLKYEKPDTQGNFFNSTKQFLKYAEEEITRIKADEKKALFLVKEVTEYFHGDAAKEEAHPFRIFMIVRDFLNILDLVCKEVGRMHDRIVGSARSFRIAASAPLPVLNRYSAKQDTSSDEESSSL* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0591 895 MobiDBLite consensus disorder prediction 347 364 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 205 223 - -
Amo05g0591 895 PANTHER FORMIN-RELATED 9 894 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo05g0591 895 Pfam Formin Homology 2 Domain 451 845 IPR015425 -
Amo05g0591 895 SMART it6_source 448 860 IPR015425 -
Amo05g0591 895 ProSiteProfiles Formin homology-2 (FH2) domain profile. 448 871 IPR015425 -
Amo05g0591 895 MobiDBLite consensus disorder prediction 439 456 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 320 335 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 45 67 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 240 269 - -
Amo05g0591 895 SUPERFAMILY Formin homology 2 domain (FH2 domain) 374 856 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 147 161 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 366 388 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 145 456 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 172 187 - -
Amo05g0591 895 Gene3D Formin, FH2 domain 455 868 IPR042201 -
Amo05g0591 895 MobiDBLite consensus disorder prediction 45 110 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 89 110 - -
Amo05g0591 895 PANTHER FORMIN-LIKE PROTEIN 9 894 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 277 301 - -
Amo05g0591 895 MobiDBLite consensus disorder prediction 389 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0591 Amo-Chr5 6823648 6828591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0591 30 885 FH2 protein (formin) Gene Family AT5G67470 56.816 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0591 - - gmx:100798670 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0591 05 6823648 6828591 Amo11g0989 11 28700155 28704510 PCT
Amo11g0989 11 28700155 28704510 Amo05g0591 05 6823648 6828591 PCT