Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0590 ATGTCTAGGGTGGACCACAATTGTTGTAATTCTCTCCAAGATGACAACAAATTCACTCCAGCACCGCCACTGCCGCCACCACCACCACCTCCTCTGCCCCGTTCAACGGCAACTAGTTGTTGTCCTTGCAGGCGCCTTGTGGCGAATTATAATTCAGCGTTGAGAGAGCGCAGCTATGTATCTCCAGCAACAATAGAATTGTGGGATCGTCTTTTTGATTCAGAATTTAAAGCAGATGTTAGGATTAATACTGGTAACGGCGGCATTGTTTACGCTCATTATAACATAGTTGCAGTGGCATCCCCCGTATTAAGAGACTTGCTGAAGCAAGGAAATTTTTTTCGGAGGTGGAGATCAATCACAATCACAGGGGTACCACATGATGCTGTTCGGGTTTTCTTTCGATATTTGTACACTTCGTGTTATGAGAAGGAAGAGATGGAAGCATATGTACTACATTTGTTAGTGCTGTCACATGTATTCATGGTTCCTCATTTGAAGCGGGAATGTGAGCAGAAACTAGAATCGAGTTTCCTCACGATAGACAATGTAATTGATGTATTTCAGATTTCATTACTGTGTGATGCTCCACGGCTTAGCCTCATCTGTCACCGTATGATACTTAGCAACTTCAAAGCAGTTTCAGAGTCTGAAGGATGGAAAGCGATGAAGGAGAGCCATCCAGTTTTAGAAAAGGAAGTTTTGGAGTCCATGATCGAGGAAGAAAATAATAAAAAGGAGAGGACCAGAAAGATCAATGAGAGGAAGATATACATGCAACTGTATGAGGCGATGGAAGCTCTTGTTCACATATGCAGAGATGGCTGCCGAACTATTGGCCCTTGTGATAAAGACTTCAAAGCAAATCAGCCATGTAAATATGCAGCATGTAAGGGGCTAGAATTGCTCGTGCGACATTTTGCTGCATGCAAACTTAGAGTCCCTGGAGGTTGTGGTCATTGCAAGAGGATGTGGCAACTATTAGAGCTGCATTCCCGAATATGTTCTGATCCCGATGGTTGTAGAGTTCCCTTGTGCAGGAACTTTAAGCAGCGGATATCGAAACAAAGCAAGAAAGAGGAAATCAGGTGGAAAATATTGGTTAAAAAGATCTTGAGAACAAGAGGTATTGGAATAGCACCATGCTTTCAGCAGCAATAA 1161 0.4307 MSRVDHNCCNSLQDDNKFTPAPPLPPPPPPPLPRSTATSCCPCRRLVANYNSALRERSYVSPATIELWDRLFDSEFKADVRINTGNGGIVYAHYNIVAVASPVLRDLLKQGNFFRRWRSITITGVPHDAVRVFFRYLYTSCYEKEEMEAYVLHLLVLSHVFMVPHLKRECEQKLESSFLTIDNVIDVFQISLLCDAPRLSLICHRMILSNFKAVSESEGWKAMKESHPVLEKEVLESMIEEENNKKERTRKINERKIYMQLYEAMEALVHICRDGCRTIGPCDKDFKANQPCKYAACKGLELLVRHFAACKLRVPGGCGHCKRMWQLLELHSRICSDPDGCRVPLCRNFKQRISKQSKKEEIRWKILVKKILRTRGIGIAPCFQQQ* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0590 386 Gene3D - 180 252 - -
Amo05g0590 386 ProSiteProfiles BTB domain profile. 78 146 IPR000210 GO:0005515
Amo05g0590 386 SMART BTB_4 78 178 IPR000210 GO:0005515
Amo05g0590 386 Gene3D Potassium Channel Kv1.1; Chain A 56 179 IPR011333 -
Amo05g0590 386 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 27 385 - -
Amo05g0590 386 SUPERFAMILY POZ domain 60 176 IPR011333 -
Amo05g0590 386 ProSiteProfiles Zinc finger TAZ-type profile. 251 349 IPR000197 -
Amo05g0590 386 Coils Coil 232 252 - -
Amo05g0590 386 Pfam BTB/POZ domain 70 176 IPR000210 GO:0005515
Amo05g0590 386 SUPERFAMILY TAZ domain 255 355 IPR035898 -
Amo05g0590 386 Pfam TAZ zinc finger 262 346 IPR000197 -
Amo05g0590 386 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 27 385 IPR044513 -
Amo05g0590 386 Gene3D TAZ domain 253 376 IPR035898 -
Amo05g0590 386 MobiDBLite consensus disorder prediction 12 37 - -
Amo05g0590 386 MobiDBLite consensus disorder prediction 19 36 - -
Amo05g0590 386 SMART TAZ_2 255 347 IPR000197 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Amo05g0590 BTB 6.3e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0590 - - lja:Lj2g3v1968190.1 560.836