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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Amo05g0573
ATGGGTGCGCCTAAGCAGAAATGGACTGCAGAAGAAGAAGCAGCGCTCAAAGCTGGAGTAGTCAAACATGGGGCTGGAAAATGGCGCACAATACTTACAGACCCAGAGTTTAGTGCCATTCTGCGCATGCGATCAAATGTAGATCTCAAGGACAAATGGAGGAATATAAATGTGACAGCAATATGGGGATCCAGGCAGAAAGCAAAGCTTGCCCTAAAAAAGAACCTACCAATTCCCAAAATTGACTGTAACCACATGGCCATAAGTACTGTAGTTCAACGGGATGAAGTTGCTGATTATAAGCCTCTGGCAATTTCTGGCGGAGCATCACAATCTGCTAATTCAAAAGAACACATATCAAGCAATATGCGTTTTGACAGTGGCAGGTTGGATACTCTCATACTAGAGTCCATTATCAAGTTAAAAGAGCCGAAAGGTTCTGACCGGGCTGCCATTGCTGCTTACATAGAGGATCAATACTCATGTCCTCCGAACCTCAGAAAGTTACTGTCAGCAAAACTGAAGCATATGGTAGCAAGTGGAAAGTTAATGAAGGTAAAGCATAAGTACAGAATTACAGGAAATTCAACAATCTCTGAGAAGAGAAGAGGCTCTTCCTTGTTACTTTTGGAAGGAAGGCCAAAAGATTCCCCCAAATCAGAGAAGACTGATGTCAGCCTCCTTTCAAAATCCCAAATTGATGCAGAGCTATCAAAAATGAAAGGTGTGACAGCTCAAGAGGCAGCGGCTGCAGCTGCAAAAGCAGTTGCAGAAGCTGAAGTTGCCATTGCTGAGGCTGAGGCAGCAGCTAGGGAGGCAGAAGCTGCAGAAGCGGAAGCAGAGGCTGCACGGGTATTTGCAAAAGCAGCAATGAAAGCACTAAAATGCAAAGCGCTTCATATCTGA
906
0.447
MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSAILRMRSNVDLKDKWRNINVTAIWGSRQKAKLALKKNLPIPKIDCNHMAISTVVQRDEVADYKPLAISGGASQSANSKEHISSNMRFDSGRLDTLILESIIKLKEPKGSDRAAIAAYIEDQYSCPPNLRKLLSAKLKHMVASGKLMKVKHKYRITGNSTISEKRRGSSLLLLEGRPKDSPKSEKTDVSLLSKSQIDAELSKMKGVTAQEAAAAAAKAVAEAEVAIAEAEAAAREAEAAEAEAEAARVFAKAAMKALKCKALHI*
302
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Amo05g0573
301
ProSiteProfiles
Linker histone H1/H5 globular (H15) domain profile.
126
194
IPR005818
GO:0000786|GO:0003677|GO:0006334
Amo05g0573
301
SMART
h15plus2
124
189
IPR005818
GO:0000786|GO:0003677|GO:0006334
Amo05g0573
301
CDD
SANT_TRF
6
57
-
-
Amo05g0573
301
Gene3D
-
126
206
IPR036388
-
Amo05g0573
301
PANTHER
SINGLE MYB HISTONE 4
1
301
IPR044597
GO:0003691
Amo05g0573
301
Coils
Coil
249
283
-
-
Amo05g0573
301
SUPERFAMILY
"Winged helix" DNA-binding domain
129
203
IPR036390
-
Amo05g0573
301
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
1
61
IPR017930
-
Amo05g0573
301
PANTHER
MYB TRANSCRIPTION FACTOR
1
301
-
-
Amo05g0573
301
SUPERFAMILY
Homeodomain-like
2
65
IPR009057
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Amo05g0573
Amo-Chr5
6648963
6653708
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Amo05g0573
1
297
Single Myb Histone (SMH) Gene Family
AT5G67580
55.482
2.53e-79
241
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB-related
Amo05g0573
Linker_histone
2.2e-11
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Amo05g0573
K09422
-
gmx:100796539
389.808
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Amo05g0573
05
6648963
6653708
Amo01g1329
01
22145198
22148980
PCT
Amo05g0573
05
6648963
6653708
Amo11g0969
11
28013070
28017270
PCT
Amo01g1329
01
22145198
22148980
Amo05g0573
05
6648963
6653708
PCT
Amo11g0969
11
28013070
28017270
Amo05g0573
05
6648963
6653708
PCT
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