Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0547 ATGGATATATTTTACCATCCACACATGGATCGGGAAATTGAATCGCTCATTGAGAGAATACATCCTCCCAGGGTCTGCATAGACAACGATTCTTGCCGAGAATGCACCGTAGTGAAGGTCGATAGTGCAAACAAGCACGGGATATTATTGGAGATGGTCCAGGTGTTGACAGATCTTGATCTTATTATTTCTAGATCATACATTTCCTCTGATGGTGGATGGTTTATGGATGTGTTCCACGTGACCGATCAAGCTGGCAAGAAGCTCACGGACGAAACCCTCATGCTCCACATTCAGCAGAAACTATGTACCACTAGAAGAAAAGGAAATATCTCGAGTGATGAAGATGATGAAACTACGTCAGAACCATATGGTTGCGATGGGCCCCACTCACCCCAAAACACGGCCCTGGAGATGACTGGGCTGGACCGGCCCGGCCTACTATCTGAAATAGCTGCGGTGCTAGCGGAGTTGGGCTGTACCGTGACCTCGGGAATGGCCTGGACCCACAACGACAGAGCGGCCTGCATCATCTACGTAGAAGACGCTTTAAAAGCAGGGCCCATCAAGGACCCAATACGGCTGGGCCACGTTCAAGAGCAGCTTCAGAACGTGGTGGAGGCCCACGGCGATATCGGAGAGAGGAAAAGCGTGAGGCTGAGAAACTTGGCGGCGGGGCGCACCCACACAGAACGGCGGCTCCACCAGCTGATGTACGCGGACAGGGACTACGAGAGCTGCCGTGCGTGTCACGGGGAGAGTAGCGGGGAGCACAAGAAGGGGTGTGATGGGACCCACGTGTCCGTTAGTAGATGCAAGGACAAAGGGTACTGGGTGGTCAACGTGAGGAGCAGGGACCGTCCTAAACTACTCTTTGATACCGTCTGCGTCTTAACCGACTTGCACTATGTGGTGTTCCACGCCGCCATCAGGTCCAAGAGTTCCATGGCCGAGCAGGAGTACTTTATAAAGCACGCCGTCGCTGGCGCTTGTCTGGACGAAGAATCCGAGAGACAAAAGCTCATCTTATGCTTAATCGCTGCCATAGAACGCAGAGTCTCCCATGTACGTCTCATTCCACCCACCATTAAGGGATTAAGGGTAGATATTCGCACCAAGAATAGGACGGGTCTACTGTCGAACGTGACAAGGGTGTTCCGTGAGAATGGACTATCGGTATCAAGGGTTGAGATTGGAACACAAGGGGACAATGCGGTGGGATCATTCTTTGTGACAGACTCTTCTGGTCAACAAGTCAACCCTAATATAGCGGAGCTGGTGAGACAAGAGTGTGGCGGAACCGTAGTTACTGATCACAAGTCGCCTTATAGGGTTCCTAAATCATCCTCCTCCTCCTTGTTGGCTATGGACGAAACCACCAACAATTTGGTGGCCAAGCCAATAGTTTCTATTGGGAACATGCTATGGTCTCAGATAGAACGCCTTTCAGGTAGTTTTGGCTCCATTAGATCCTGA 1476 0.5122 MDIFYHPHMDREIESLIERIHPPRVCIDNDSCRECTVVKVDSANKHGILLEMVQVLTDLDLIISRSYISSDGGWFMDVFHVTDQAGKKLTDETLMLHIQQKLCTTRRKGNISSDEDDETTSEPYGCDGPHSPQNTALEMTGLDRPGLLSEIAAVLAELGCTVTSGMAWTHNDRAACIIYVEDALKAGPIKDPIRLGHVQEQLQNVVEAHGDIGERKSVRLRNLAAGRTHTERRLHQLMYADRDYESCRACHGESSGEHKKGCDGTHVSVSRCKDKGYWVVNVRSRDRPKLLFDTVCVLTDLHYVVFHAAIRSKSSMAEQEYFIKHAVAGACLDEESERQKLILCLIAAIERRVSHVRLIPPTIKGLRVDIRTKNRTGLLSNVTRVFRENGLSVSRVEIGTQGDNAVGSFFVTDSSGQQVNPNIAELVRQECGGTVVTDHKSPYRVPKSSSSSLLAMDETTNNLVAKPIVSIGNMLWSQIERLSGSFGSIRS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0547 491 Pfam ACT domain 370 431 IPR002912 -
Amo05g0547 491 SUPERFAMILY ACT-like 366 423 IPR045865 -
Amo05g0547 491 ProSiteProfiles ACT domain profile. 367 444 IPR002912 -
Amo05g0547 491 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 490 IPR040217 -
Amo05g0547 491 ProSiteProfiles ACT domain profile. 279 361 IPR002912 -
Amo05g0547 491 SUPERFAMILY ACT-like 132 210 IPR045865 -
Amo05g0547 491 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR1 4 490 - -
Amo05g0547 491 SUPERFAMILY ACT-like 32 90 IPR045865 -
Amo05g0547 491 CDD ACT_ACR_1 35 106 - -
Amo05g0547 491 MobiDBLite consensus disorder prediction 107 131 - -
Amo05g0547 491 ProSiteProfiles ACT domain profile. 136 217 IPR002912 -
Amo05g0547 491 Gene3D - 134 209 - -
Amo05g0547 491 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0547 Amo-Chr5 6344734 6348215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0547 - - adu:107487637 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0547 05 6344734 6348215 Amo11g0858 11 20286034 20287743 PCT
Amo11g0858 11 20286034 20287743 Amo05g0547 05 6344734 6348215 PCT