Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0524 ATGGCTGGTATTCACAAAATCGCACAAATCAATCCTACAATCGACAATTTGTGTGTACGTATACGAGTGATACGGTTATGGAGACTACCAAGTTACGAAAATTCTTTATTGCCATACTCAATTGAGATGGTTTGCCTCGATGAAAATGGAGGAAAAATACAAGCCTCGGTTAAGAGGTTTCTTGTGTCTCGATTCGTGAATTTGCTAAAGGAAGGAATATCTTACCAAATAAGATATTTTGGTGTTGGACTCAATGAGGGTAACTTCAAGACTACACATCATGAGTATGTGGTGAATTTAAACCAACGTACATATGTGTACAGACTTCCAGAATCGTTAAGTATCCCACGATATGGATTTAATTTTGTGAGTTTTGACACTCTTAATACACATAGGTATGATTACACCTACTTAGTTGATAAGATCAAAGGTGAGAAGAAAGTCTTTAATTTAACATAG 459 0.3573 MAGIHKIAQINPTIDNLCVRIRVIRLWRLPSYENSLLPYSIEMVCLDENGGKIQASVKRFLVSRFVNLLKEGISYQIRYFGVGLNEGNFKTTHHEYVVNLNQRTYVYRLPESLSIPRYGFNFVSFDTLNTHRYDYTYLVDKIKGEKKVFNLT* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0524 152 Gene3D - 3 110 IPR012340 -
Amo05g0524 152 SUPERFAMILY Nucleic acid-binding proteins 2 112 IPR012340 -
Amo05g0524 152 Pfam Domain of unknown function DUF223 43 134 IPR003871 -
Amo05g0524 152 CDD RPA1_DBD_A_like 18 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0524 Amo-Chr5 6088578 6090519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0524 4 131 Core DNA Replication Machinery Family AT5G08020 26.515 6.02e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0524 - - adu:107472352 233.032