Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0498 ATGCGTCTCCTTTGCTTTCTTGTGGTCTTGTTACAGCACTATCATCAAACCCTCTCCGCAACCATGTCGGAGAACCGTGCTCTTCTCTCTCTCAGAGCCGCCATCACTGATGCAACCCCTCCCTCTCTCTCTTCCTGGAACGCCACCACCCCATACTGCTCCTGGCTCGCCGTAACCTGCGACCACCGCCGCCACGTCATTGCCCTCGACCTCACTGGCCTGGGCCTCTCTGGTACGCTCTCCGGCGATGTCTCCCACCTCCCCTTCCTCTCCAACCTCTCTCTCGCCGACAACACCTTCTCCGGCCCCATCCCGCCTTCTCTCTCGTCACTCTCCGCACTCCGACTCCTCAACCTCTCCAACAACGGCTTCAACGGAACCTTCCCCGACGAACTCTCTCGCCTCAACAACCTGCAAGTTCTCGACCTCTACAACAACAACCTCACCGGACAGCTTCCTCTTGCCGTCACTCAGATGCAGAACCTCCTGCATTTGCACCTAGGTGGCAACTACTTCTTCGGCCAGATCCCGCCCGAGTACGGAAGCTGGCACCGTCTCCAGTACCTGGCTGTTTCCGGTAACGAGCTCGCCGGACCTATCCCGCCGGAGATTGGGAACCTCACCAGCCTCCGGGAGCTTTACATTGGCTACTACAACACCTACACCGGCGGCATTCCGCCGGAGATCGGAAACATGTCGGCGCTGGTTAGGTTCGACGCTGCCAACTGTGGATTAACCGGGGAGATTCCACGGGAGATTGGAAAGCTCCAGAACCTCGACACTCTGTTTCTTCAGGTGAATGCGCTTGCAGGTTCACTGACGAGAGAGATTGGGAATTTAAAGAGCTTAAAATCATTGGATTTATCCAACAACGCACTTTCCGGCGAGATTCCGGCGAGTTTTGCGGAGCTGAAAAACCTAACTCTGCTGAACCTGTTCAGGAACAAGCTTCACGGTTCAATACCAGAGTTCATTGGTGAGTTACCAGCATTGGAAGTGCTTCACCTTTGGGAGAACAACTTCACCGGAAGCATTCCTCAGGGTTTGGGAAACAACGGTAAGCTCATCGACGTTGATCTTTCTTCCAACAAGCTGACTGGGACGCTTCCTCCTCACGTGTGTTCTGGTAACCGCCTTCAGACTCTGATAACTCTGGGTAACTTTCTCTTCGGTCCAATCCCTGAATCGCTTGGCAAGTGTGAATCCCTCAATAGGATCCGAATGGGTGACAATTTTCTCAATGGTTCAATCCCAAAGGGTCTCTTCGGCCTTCCGAATATCTCGCAGGTTGAGCTTCAGGACAATCTTCTCACGGGTCAGTTCCCTGAAGCTGATGCTTTCTCTGTGAATCTCGGTCAGATTAGTCTTTCTAACAACCAGCTTTCTGGGCCGTTGCCACCTTCCATTGGGAACTTCTCCGGCATGCAAAAACTCCTCCTTGATGGCAACAAGTTCTCTGGTCCGATCCCACCGCAGATTGGGAGGTTGCAGCAGCTGTCCAAAATTGATATCAGCCACAATCTTCTCTCGGGTCCTATCCCGAAAGAGATTAGCCAATGCAAGTTGTTAACTTTCGTTGATCTTAGCCGAAATGAGCTCTCTGGTGAGATTCCTAACGAGGTCACCGGAATGAGGATACTGAATTACTTGAACCTCTCCAGGAACCATCTTGTTGGTGACATTCCTTCGTCCATATCCACAATGCAGAGCTTGACTTCTGTTGATTTTTCGTATAACAATCTCTCTGGTTTGGTTCCTGGCACCGGCCAATTCAGCTACTTCAACTACACCTCTTTCCTTGGAAACCCTGATCTCTGCGGACCCTATTTGAGTCCTTGCAAGGATGGTTCTGGCAGTGGTGGCCACCAAAATCATGCTAAAGGCCATCTCTCTTCTTCTTTGAAGCTTATAATTGTGATAGGATTGCTTGTGTTCTCCATTGTTTTTGCAGCAGTGGCAATCTTAAAGGCTAGGTCTTTGAAGAAGGCAAGCGAGGGTCGCTCTTGGAAATTGACTGCATTCCAACGTTTGGACTTCACGGTGGATGATGTTTTGGATTGCTTGAAAGAGGACAACATAATAGGGAAAGGAGGTGCAGGCATTGTGTACAAGGGCGCAATGCCGAACGGGGAGCAGGTTGCTGTGAAGAGGCTTCCAGCTATGAGTAGAGGCTCTTCTCATGATCATGGATTCAATGCGGAGATTCAGACATTGGGGCGGATCCGACACAGGCACATTGTTAGGTTACTAGGTTTCTGTTCTAACCATGAGACCAATCTTTTAGTGTATGAGTACATGCCCAATGGAAGTCTAGGTGAAGTTCTTCATGGGAAGAAAGGGGGGCATTTGCATTGGGACACAAGGTACAAAATTGCTGTGGAGGCTGCAAAGGGTCTTTGCTATCTACACCATGATTGTTCACCTCTCATTGTTCATCGAGATGTGAAATCAAACAACATACTTCTTGATTCTGGTTTTGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAATTCTTGCAAGATTCTGGAGCATCTGAGTGCATGTCCGCAATTGCCGGATCATATGGATACATAGCCCCCGAGTATGCCTACACATTGAAAGTCGATGAGAAGAGCGATGTGTACAGCTTTGGCGTGGTCCTTTTGGAGCTCATAACAGGGAGGAAACCAGTTGGAGAATTCGGAGACGGTGTGGATATTGTGCAGTGGGTGAGGAAAATGACAGACTCTAACAAGGAAGGAGCTCTCAAAGTTCTTGATCCAAGGCTTCCCTCAGTTCCCCTTCATGAGGTGATGCATGTTTTCTATGTAGCAATGCTGTGTGTTGAAGAACAAGCAATAGAGCGTCCAACTATGCGTGAAGTTGTTCAGATTCTCACAGAGGTTCCAAAGCCTCCTGGGTCTAAACAAGGAGACTTAACAATTACAGAGTCATCTTTGTCTTCATCAAAAGCATTAGAGTCTCCAAATGCAGCCTCAAATGATCATGAACATGAACATGAGCATGAGCATGAACACCCCCCTCAATCTCCACCAACTGATCTTCTAAGCATTTGA 3057 0.4939 MRLLCFLVVLLQHYHQTLSATMSENRALLSLRAAITDATPPSLSSWNATTPYCSWLAVTCDHRRHVIALDLTGLGLSGTLSGDVSHLPFLSNLSLADNTFSGPIPPSLSSLSALRLLNLSNNGFNGTFPDELSRLNNLQVLDLYNNNLTGQLPLAVTQMQNLLHLHLGGNYFFGQIPPEYGSWHRLQYLAVSGNELAGPIPPEIGNLTSLRELYIGYYNTYTGGIPPEIGNMSALVRFDAANCGLTGEIPREIGKLQNLDTLFLQVNALAGSLTREIGNLKSLKSLDLSNNALSGEIPASFAELKNLTLLNLFRNKLHGSIPEFIGELPALEVLHLWENNFTGSIPQGLGNNGKLIDVDLSSNKLTGTLPPHVCSGNRLQTLITLGNFLFGPIPESLGKCESLNRIRMGDNFLNGSIPKGLFGLPNISQVELQDNLLTGQFPEADAFSVNLGQISLSNNQLSGPLPPSIGNFSGMQKLLLDGNKFSGPIPPQIGRLQQLSKIDISHNLLSGPIPKEISQCKLLTFVDLSRNELSGEIPNEVTGMRILNYLNLSRNHLVGDIPSSISTMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLSPCKDGSGSGGHQNHAKGHLSSSLKLIIVIGLLVFSIVFAAVAILKARSLKKASEGRSWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGEQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSGFEAHVADFGLAKFLQDSGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGALKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAIERPTMREVVQILTEVPKPPGSKQGDLTITESSLSSSKALESPNAASNDHEHEHEHEHEHPPQSPPTDLLSI* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0498 1018 MobiDBLite consensus disorder prediction 962 1018 - -
Amo05g0498 1018 MobiDBLite consensus disorder prediction 971 990 - -
Amo05g0498 1018 MobiDBLite consensus disorder prediction 991 1009 - -
Amo05g0498 1018 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Amo05g0498 1018 Gene3D Transferase(Phosphotransferase) domain 1 766 973 - -
Amo05g0498 1018 SUPERFAMILY Protein kinase-like (PK-like) 681 959 IPR011009 -
Amo05g0498 1018 Gene3D Ribonuclease Inhibitor 21 217 IPR032675 -
Amo05g0498 1018 Gene3D Ribonuclease Inhibitor 378 614 IPR032675 -
Amo05g0498 1018 SUPERFAMILY RNI-like 69 390 - -
Amo05g0498 1018 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1000 - -
Amo05g0498 1018 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 1000 - -
Amo05g0498 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Amo05g0498 1018 Gene3D Ribonuclease Inhibitor 218 377 IPR032675 -
Amo05g0498 1018 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Amo05g0498 1018 SUPERFAMILY L domain-like 295 613 - -
Amo05g0498 1018 SMART LRR_typ_2 568 591 IPR003591 -
Amo05g0498 1018 SMART LRR_typ_2 135 159 IPR003591 -
Amo05g0498 1018 SMART LRR_typ_2 496 520 IPR003591 -
Amo05g0498 1018 SMART LRR_typ_2 328 352 IPR003591 -
Amo05g0498 1018 SMART LRR_typ_2 280 303 IPR003591 -
Amo05g0498 1018 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0498 1018 Gene3D Phosphorylase Kinase; domain 1 656 765 - -
Amo05g0498 1018 SMART serkin_6 688 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0498 1018 Pfam Protein tyrosine and serine/threonine kinase 690 959 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0498 Amo-Chr5 5795040 5799471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0498 13 989 Receptor kinase-like Gene Family AT5G65700 79.919 0.0 1583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo05g0498 PK_Tyr_Ser-Thr 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0498 - - ccaj:109800149 1678.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0498 05 5795040 5799471 Amo01g1400 01 25678547 25682145 PCT
Amo05g0498 05 5795040 5799471 Amo11g0882 11 24089879 24094055 PCT
Amo01g1400 01 25678547 25682145 Amo05g0498 05 5795040 5799471 PCT
Amo11g0882 11 24089879 24094055 Amo05g0498 05 5795040 5799471 PCT