Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0436 ATGAATGGGTGTAATGTCTTACGTGAGCTGATGACTGATGACAACTGGGTCTCACTTCTGTCCATTTCTATCCATTATTTTATAAAATATTTATTTCTGCAACGAATTCACGCGGCTTCTCTTTCTATTTCTCTTCTGCAACTTGCACCATTTCCCACGCGCCTTTTTCATCCATCATTTCATTCTTCAGAATATTCGGTTAAGTTCAACCGAATTCATGCTTACAATATGATGTGTTTATTCTTCAAACGAAAATCCAAATCCGAGCCACAGCTGCAAAAAACAACCAGGAACAGCAAGGTGAAGTCCACCAACTCGCGATCGTTATCGCCATCGCCAAGGAGTGTTAATGAATTGTATAAGGAGAACCAGCACAATTTCAGGGTCTTCACTCTCAGGGAGCTCGTAGATGCAACCAATGGTTTCAATAGAACGCTCAAGATCGGTGAAGGTGGTTTCGGAAGTGTTTATAGAGGAACCATTCCACCTCTACATCGACATGAGGATCCAATTCTCGTTGCTATCAAAAAGCTCAACACTCGTGGCTTTCAGGGGCACAAAGAATGGCTTGCTGAAGTTCAATTTCTCGGCATCGTTAACCACCCCAATTTAGTTAAGTTATTGGGATACTGCTCTGTAGACACCGAGAGAGGAATTCAAAGGCTATTGGTGTATGAATTCATGCCAAATAGGAGCCTAGAGGATCATCTTTTCAACCATTCTTTACCTCACTTGCCTTGGAAAACTAGATTGCAGATCATGCTTGGTGCTGCTGAAGGATTGGATTACTTACATGAGGGATTGGAAGTTCAGGTGATCTACAGAGATTTCAAATCTTCAAATGTGCTGTTGGACAAAAGTTTCCATCCCAAGCTCTCGGATTTCGGTCTAGCTAGGGAGGGCCCAACCGGTGATCAGACTCATGTATCTACTGCAGTAGTTGGAACACAGGGATATGCAGCGCCGGAGTATGTTGGAACAGGACATCTCAAAGCTAAGAGTGACATATGGAGTTTCGGCGTGGTGCTCTACGAGATTCTCACAGGCAGGAGGGTACTGGAAAGAGATCGTCCCACAGGAGAACAGAAGCTTCTAGAGTGGGTCAAGAAGTACCCTGCTGATACTAGCAGATTCAGCACCATAGTAGACCCTCGCCTCAGGAACCAATACTCCCTTGTTTCGGCTCGAAAGATCGCCAAGTTGGCAGATAATTGCTTGAAGAAGAATGCCGAGGACAGGCCATCCATGAGTGAGATAGTGGAAAGCTTGAAGCAAGCATTGCAGCTTTCAGAAACCTCAAACAATTTTCAAAAAGGTTAA 1320 0.4409 MNGCNVLRELMTDDNWVSLLSISIHYFIKYLFLQRIHAASLSISLLQLAPFPTRLFHPSFHSSEYSVKFNRIHAYNMMCLFFKRKSKSEPQLQKTTRNSKVKSTNSRSLSPSPRSVNELYKENQHNFRVFTLRELVDATNGFNRTLKIGEGGFGSVYRGTIPPLHRHEDPILVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDTERGIQRLLVYEFMPNRSLEDHLFNHSLPHLPWKTRLQIMLGAAEGLDYLHEGLEVQVIYRDFKSSNVLLDKSFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVGTGHLKAKSDIWSFGVVLYEILTGRRVLERDRPTGEQKLLEWVKKYPADTSRFSTIVDPRLRNQYSLVSARKIAKLADNCLKKNAEDRPSMSEIVESLKQALQLSETSNNFQKG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0436 439 ProSiteProfiles Protein kinase domain profile. 142 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0436 439 PANTHER RECEPTOR-LIKE KINASE PLANT 94 432 - -
Amo05g0436 439 PANTHER OS01G0588500 PROTEIN-RELATED 94 432 - -
Amo05g0436 439 MobiDBLite consensus disorder prediction 92 115 - -
Amo05g0436 439 Gene3D Phosphorylase Kinase; domain 1 114 227 - -
Amo05g0436 439 ProSitePatterns Protein kinases ATP-binding region signature. 148 177 IPR017441 GO:0005524
Amo05g0436 439 MobiDBLite consensus disorder prediction 90 115 - -
Amo05g0436 439 Pfam Protein kinase domain 144 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0436 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Amo05g0436 439 SUPERFAMILY Protein kinase-like (PK-like) 123 423 IPR011009 -
Amo05g0436 439 Gene3D Transferase(Phosphotransferase) domain 1 228 438 - -
Amo05g0436 439 CDD STKc_IRAK 148 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0436 Amo-Chr5 5028808 5031332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0436 79 423 Glycoside Hydrolase AT3G07070 43.575 1.86e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo05g0436 Pkinase 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0436 - K00924 adu:107487526 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0436 05 5028808 5031332 Amo11g1137 11 36308434 36311841 PCT
Amo11g1137 11 36308434 36311841 Amo05g0436 05 5028808 5031332 PCT