Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0429 ATGGAGGAACGGTATGAGCCAATCAAGGACCTTGGTTCTGGAAATTTCGGAGTTGCTAGGTTGGCTAAAGACAAGAAAACAGGGGAGCTTGTTGCTGTTAAATACATTCAAAGGGGTAAAAAGTTTGCATTATCAAATTCAAAGCAAAAGTTTCAAATAATTAACCACCGATCTCTAAGGCACCCTAACATTATCAGGTTCAAAGAGGTGTTTCTCACTCCAACTCATTTAGCTATTGTTCTGGAATATGCTGCTGGTGGTGAACTCTTTGGGAGGATTTGTACAGCTGGTCGATTTAGCGAAGATGAGGCAAGATTTTTCTTCCAGCAACTCATATCTGGAGTTAGCTACTGTCATTCAATGCAAATTTGTCATAGAGATCTGAAACTGGAAAACACTCTCTTGGACGGTAATCCCGCACCTCGACTTAAGATTTGTGACTTCGGTTTCTCCAAGTCTGCATTGCTGCATTCGCAGCCTAAGTCAACAGTTGGAACACCAGCATATATTGCTCCAGAGGTTTTGTCTCGAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCATGTGGGGTGACTCTGTATGTAATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAGAGACTTCAGAAAGACTATTGGGAGTGTAGGCATCTTCTCACTTGCATTTTTGTTGCCAATCCAGCCAAGGCAAAGGATTACTATTCCGGAGATAAAACAGCACACATGGTTCTTGAAGAACTTGCCTAGAGAGATAATTGAGGCTGATAGAAGAATCAATGAAGAAAGTGGGAAGGAGGAGCCACCAAGCCAAAGTGTTGAAGAAATCATGCGTATAGTCAAAGAGGCAAGGAAACCATATCCAGGATTAAAATTGGATTCTGAAGATGCTGAAGTTAAAGAGGGACTTAATGTTATTGAAGACTCTAAAAAACCTCTTTCATCCTTAACTTAA 966 0.4089 MEERYEPIKDLGSGNFGVARLAKDKKTGELVAVKYIQRGKKFALSNSKQKFQIINHRSLRHPNIIRFKEVFLTPTHLAIVLEYAAGGELFGRICTAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRDFRKTIGSVGIFSLAFLLPIQPRQRITIPEIKQHTWFLKNLPREIIEADRRINEESGKEEPPSQSVEEIMRIVKEARKPYPGLKLDSEDAEVKEGLNVIEDSKKPLSSLT* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0429 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Amo05g0429 321 Pfam Protein kinase domain 5 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0429 321 SMART serkin_6 5 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0429 321 ProSiteProfiles Protein kinase domain profile. 5 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0429 321 PANTHER SERINE/THREONINE KINASE 3 220 - -
Amo05g0429 321 PANTHER SERINE/THREONINE KINASE 231 289 - -
Amo05g0429 321 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Amo05g0429 321 SUPERFAMILY Protein kinase-like (PK-like) 3 259 IPR011009 -
Amo05g0429 321 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 220 - -
Amo05g0429 321 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 231 289 - -
Amo05g0429 321 Gene3D Transferase(Phosphotransferase) domain 1 84 255 - -
Amo05g0429 321 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0429 Amo-Chr5 4947710 4949535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0429 4 258 CBL-interacting serine-threonine protein kinases AT4G24400 42.491 2.59e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo05g0429 Pkinase 7.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0429 K14498 - gmx:100817713 468.388