Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0422 ATGGATGGGGTGAGAAAGACTTTGAATTCAGAACTGTGGCATGCTTGTGCTGGCCCTCTTGTCTCTTTGCCTCAAGTGGAAATTCTTGTTTATTACTTACCCCAGGGACATAGTGAGGAGATGATCTCTGCTTGTCCAGCCTATGCTAAATCCTCCGTCTCATTTCTGAAGATTCCAATTGTAGAGTTTTGGAGCAAAGAAAAGGAGGGCTCAAAGCGACCACATAGCGAAAATTGCTTTACCAGATTTGGTCAATTCTCAAGAGAAAGTGCAGATGGTGAAGATGGCATGGTGATTAAGATGGATGGAGAGCTATGGCAATCTCTAGAGTCTTGTTTTGTTTCCATTATTCTTGCGTTGTCGTCTGCAGATCAGGCAAAGGTTTTAACTGAATGGTTGGAAAATGAGTGTATTCGGTATCCGGACCTAACTGAGGCATTTGAAGTACAGTGCTATAGGTCTAAGATTCGGTTTCTTTCTAATGAACTACTTAGAACTGCTTATCCAAAGATTCCTATCCTAGTAAAGTCAAGGCATTTAGAAGAGAATATGAACCCCTTTTTTTTCGGCTTATCAACAATATCTGGCTCAGGCGTGATGGATCCTTTGTTGGATTTGGCTCAAAATGGCATAGATAGAGGAAAAAGGAAGGCAGCACAATTGCTAGAACGCATGAGCATGTTCCTTGAACAGTAG 696 0.4181 MDGVRKTLNSELWHACAGPLVSLPQVEILVYYLPQGHSEEMISACPAYAKSSVSFLKIPIVEFWSKEKEGSKRPHSENCFTRFGQFSRESADGEDGMVIKMDGELWQSLESCFVSIILALSSADQAKVLTEWLENECIRYPDLTEAFEVQCYRSKIRFLSNELLRTAYPKIPILVKSRHLEENMNPFFFGLSTISGSGVMDPLLDLAQNGIDRGKRKAAQLLERMSMFLEQ* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0422 231 PANTHER OS07G0668800 PROTEIN 98 156 - -
Amo05g0422 231 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 98 156 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0422 Amo-Chr5 4877008 4879017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0422 2 44 B3 DNA Binding Superfamily AT1G19220 62.791 9.35e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0422 - - ahf:112705293 199.134