Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0408 ATGTGCCGCCAAAATTCTCCCGTTCACCATTCCGGCGACGAAGACACCGCCGCCGACGAGAGCCTCTTGATTTACTGCAAGCCTGTTGAGCTTTACAACATCCTCTACCGTCGTTCTCTTCACAACCCTTCATTTCTTAGGAGATCTCTGCGGTATAAAATAAAAGCAAGGCGTAAAAGGAGGTTGAGGGGAGGAATTGTGATTTTCAACTACAGGGATTGTTACAACATGATACGAAAGACTGAAGTGACTGAACATTTTTCTTGTCCATTTTGCTTGATGCAATGTGCCAGCTTTAAGGGTTTGCGATTTCATCTTTGTTCATCACATGATCTATTCAACTTTGAGTTCTGGGTGACTGATGATTACCAAGCAGTTAATGTCTCTGTAAAAATTGATATATTGAGATCAGAGAGTGTTGCTGACGGAGTAAATCCACAATCACAAACCTTCATCTTCTGTTCAAGACCCCGAAAACGTTTACGAAAGGACTCTGTTCAAAATGAAAAACGAGCCAATGTAAAGTTCCTAGAGTTGGACTCACCAGAGGGAACACAGAATGGATTTCTAGAGAAGAATGATGATATCCTTTCCTACAAAGGGGAGAATATGTCTAAAACATGTCATATTCAGAAGAATTTACAAATGGAAAAACAAGGTGTCGAAAGATTTGGTCCCAATGTTCCTGGCACTGCAGACTGCCTCGAATATGTTGCATCCAGTTTCAACATTCAAGGTGTTTCAATTGCCATGCCGCAATCTTCAGGAGATCCAGAAACTAGTAAGTCAGTATATAGAAGTGATCCTGCTGTGCCTGCTAAAACAAAGAAGTTAAACATGGATCGATCTGACTCAAAAAACCGAATGCTCCTGCAGAAGAGACAGTTCTTTCACTCACATAGAGTTCAGCCTATGGCTCTAGAACAAGTGTTATCAGATCGCGATAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGCAACTCATGCATCTGTGGAACTCTTTTATGAGGAAGCAAAGAGTGCTGGCTGATGGCCATGTTTCGTGGGCATGTGAGGCATTTTCCAAGCTTCACGGAAAAGAGCTAATCTCATCCCCAGCTTTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCACGGTCTTCTTGATGCTTGCACAATGAACAACTGTAGTATAATATTAGATAGTTACAGAAATGAAGGGTTGGATAACGGCAAGAATTAG 1287 0.411 MCRQNSPVHHSGDEDTAADESLLIYCKPVELYNILYRRSLHNPSFLRRSLRYKIKARRKRRLRGGIVIFNYRDCYNMIRKTEVTEHFSCPFCLMQCASFKGLRFHLCSSHDLFNFEFWVTDDYQAVNVSVKIDILRSESVADGVNPQSQTFIFCSRPRKRLRKDSVQNEKRANVKFLELDSPEGTQNGFLEKNDDILSYKGENMSKTCHIQKNLQMEKQGVERFGPNVPGTADCLEYVASSFNIQGVSIAMPQSSGDPETSKSVYRSDPAVPAKTKKLNMDRSDSKNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVSWACEAFSKLHGKELISSPALFWCWRLFMIKLWNHGLLDACTMNNCSIILDSYRNEGLDNGKN* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0408 428 PANTHER POLYCOMB GROUP PROTEIN 1 62 - -
Amo05g0408 428 PANTHER POLYCOMB GROUP PROTEIN 61 426 - -
Amo05g0408 428 Pfam VEFS-Box of polycomb protein 278 413 IPR019135 -
Amo05g0408 428 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 62 - -
Amo05g0408 428 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 61 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0408 Amo-Chr5 4724217 4732358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0408 1 68 C2H2 Transcription Factor Family AT5G51230 51.471 2.16e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0408 - - gmx:100807112 713.761