Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0405 ATGGCTTCAGCAACCTTTTTCATCGCTTCCCTTCTCTTTCTTCACATCACACTAGCCTTTGCCAACATTACCATAAATTCAACACTCTCCACCACCAACAACAACAATGCATGGCGTTCACCTTCAGCTGAATTTGCTTTTGGATTTCACCAACTCAAAGACACAAATCTCTTCATAGTTGCCATATGGTACGACAAAATACCAGAAAAAACCATAGTTTGGAGTTCATATTCACTCAGCAATCCAACACCAACAGGATCAAAGATTCAGTTAACACCATCAGGTCTAAAACTAACAACTCCCAATGGTGAATCCACATGGATAGCACAAACCAACAACCCTGTTTCCCATGGTTCTATGCTTGACACTGGAAACTTTGTTCTTGCAAGCAGTGATAACAAGAAACTTTTGTGGCAAAGTTTCAAGAACCCCACAGATACTTTGTTGCCAAACCAAACTCTTGAATCTGATGCCACTCTCACTTCTAGATTGAGTGATACAAACTACACAAGAGGGAGGTTTCAACTCTATTTTCAGAATGACACCATCTTGTTAAGTCCTCTAGCATGGCCTACCGAATTTCGCTATGATTACTACGATGTTTTCGGACATGCTGCACGCTTGGTGTTTGATGAAAGTGGTGAGATATATCTGGAGACAGAGAATGGTAATAGAACAACACCACAAGCTCCTAAATGGCAACCCAACTTAGCTCTTGATCCTAGGAACAATTACTATAGAGCTACACTTGATTACTATGGAGTTTTAACTCAATATGTTCATCCAAAGGACTCAAATTCTCAGCAAGGGTGGAGAGTTTTAAGGTACACTCCTAGTAACATTTGCACAAGTATTTTCAATGATTATGGAAGTGGTGCTTGTGGTTACAATAGCTATTGCTCCATGGAAGAACAGAGGCCTACTTGCAATTGCCCTGATGGGTATACTCTGATTGATCCAAGCAATGTTTTTGGTGGATGCCAACCGAATTTCACTCTTGGTTGCGGAGCAGATAATTATGGCAAAGAATTGCAAGCGCGCCCAGAAGATCTATATAATTTTAGTGTTTTGAGTGATGTGGATTTTCCTCTTAATGATTATGAGCAGATTCAACCTTATTCTCAAGATGAGTGCCAACAAGATTGTTTACATGATTGCAATTGTGCTGTTGCAATCTATACCAACAATCAAACCTGTTGGAAGAAGAGGTTGCCTCTTTCTAACGGAAGAACACAAAGTGGAGGTCAAACAATACTTATCAAAACAAGAGTTGCACCTCTTGGCATTCCCACTGGTGCTGAATCAAAGAAAGATCATAATAAGATTAAGCCAGGTTTTCATGGATTACTTATTGGATCGCTTGTCATCAATGTTGTACTCCTGGCTGCAGTTCTTTTGGCTTTTCACCTGAAGAAGCGAAAAAGGGACATCAAAGTCTCAAGTCTTCTAGAAACAAATCTGCATTCTTTTAGCTATGAAGCACTGAAGGATGCAACACGGGAGTTTAGCGAAGAACTGGGACGGGGTTCCTTTGGCATTGTTTACAAAGGAACCATAGAATCAAGGTTTTATAATGTGGTGGCAGTCAAGAAGCTTGACAGATTGGCACAAGAAGGAGAGAAGGAATTCAAGGCTGAGTTGAGTGCCATTGGTAAAACCTGCCACAAGAATCTGGTAAGGTTGATTGGATTCTGTGATGAGGGAACTAACAGAATGCTTGTCTATGAGTTCATGAGCAAAGGTGCTCTGGCAAACTTCCTATTTGGACAAACCAAACCCATTTGGGATCTAAGGGTAAGGTTTGCTTTGGGGATTGCAAGAGAGTTGGTGTACTTGCATGAAGAGTGTGACACTCCCATCATTCATTGTGACATAAAACCTCAGAATATACTCATAGATGATAACTTCAATGCAAAGATATCTGACTTCGGGTTGGCCAAGTTGTTGTTGTCTGATCAGAGCAGGACCAACACCATGATCCGAGGAACAAGAGGTTATGTTGCTCCGGAATGGTTCAGGAATGTTCCTGTGACGGTTAAGGTGGATGTTTATAGCTTCGGCGTTATGTTACTAGAGATCATTTGCTGCAGAAAGAGTGTGCTGATGTTGGAGTCCGGGGAGGAAGAGAAGGCTGTGCTGACTGATTGGGCTTATGATTGCTTTGTAGAAAGGAAAATAGATGCCTTGGTGGATGATGATACGGAGGCTATAGCTGACAGTGGAAGGTTACAAAGGTGGGTGAAGATAGCAATTTGGTGCATTCAAGAGCATCATGAAAAGAGGCCAACAATGGGGATTGTGTTGCAAATGCTTGAAGGCTTGGTTGAAGTCTCGGATCCACCATCACCCTTTTCTTTAAATCCGGGGCTGCCTGTTATAGACGGTGTCCTTGGACCATGCACATGCAGCCATATTCGCATGATTGAATTGTCTCGAAATTCCATCCATTAA 2451 0.4174 MASATFFIASLLFLHITLAFANITINSTLSTTNNNNAWRSPSAEFAFGFHQLKDTNLFIVAIWYDKIPEKTIVWSSYSLSNPTPTGSKIQLTPSGLKLTTPNGESTWIAQTNNPVSHGSMLDTGNFVLASSDNKKLLWQSFKNPTDTLLPNQTLESDATLTSRLSDTNYTRGRFQLYFQNDTILLSPLAWPTEFRYDYYDVFGHAARLVFDESGEIYLETENGNRTTPQAPKWQPNLALDPRNNYYRATLDYYGVLTQYVHPKDSNSQQGWRVLRYTPSNICTSIFNDYGSGACGYNSYCSMEEQRPTCNCPDGYTLIDPSNVFGGCQPNFTLGCGADNYGKELQARPEDLYNFSVLSDVDFPLNDYEQIQPYSQDECQQDCLHDCNCAVAIYTNNQTCWKKRLPLSNGRTQSGGQTILIKTRVAPLGIPTGAESKKDHNKIKPGFHGLLIGSLVINVVLLAAVLLAFHLKKRKRDIKVSSLLETNLHSFSYEALKDATREFSEELGRGSFGIVYKGTIESRFYNVVAVKKLDRLAQEGEKEFKAELSAIGKTCHKNLVRLIGFCDEGTNRMLVYEFMSKGALANFLFGQTKPIWDLRVRFALGIARELVYLHEECDTPIIHCDIKPQNILIDDNFNAKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFRNVPVTVKVDVYSFGVMLLEIICCRKSVLMLESGEEEKAVLTDWAYDCFVERKIDALVDDDTEAIADSGRLQRWVKIAIWCIQEHHEKRPTMGIVLQMLEGLVEVSDPPSPFSLNPGLPVIDGVLGPCTCSHIRMIELSRNSIH* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0405 816 CDD PAN_AP_plant 331 422 - -
Amo05g0405 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 184 IPR036426 -
Amo05g0405 816 Gene3D Phosphorylase Kinase; domain 1 464 577 - -
Amo05g0405 816 SMART blect_4 29 144 IPR001480 -
Amo05g0405 816 ProSiteProfiles PAN/Apple domain profile. 335 425 IPR003609 -
Amo05g0405 816 Pfam D-mannose binding lectin 83 158 IPR001480 -
Amo05g0405 816 Gene3D - 144 268 IPR036426 -
Amo05g0405 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 787 - -
Amo05g0405 816 ProSiteProfiles Bulb-type lectin domain profile. 23 141 IPR001480 -
Amo05g0405 816 ProSitePatterns Protein kinases ATP-binding region signature. 506 531 IPR017441 GO:0005524
Amo05g0405 816 Pfam PAN-like domain 354 400 IPR003609 -
Amo05g0405 816 SUPERFAMILY Protein kinase-like (PK-like) 477 772 IPR011009 -
Amo05g0405 816 SMART serkin_6 500 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0405 816 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 787 - -
Amo05g0405 816 ProSiteProfiles Protein kinase domain profile. 500 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0405 816 PIRSF SRK 1 789 IPR024171 GO:0004674
Amo05g0405 816 Gene3D Transferase(Phosphotransferase) domain 1 578 778 - -
Amo05g0405 816 Gene3D - 21 143 IPR036426 -
Amo05g0405 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Amo05g0405 816 Gene3D Hepatocyte Growth Factor 353 418 - -
Amo05g0405 816 Pfam Protein kinase domain 502 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0405 Amo-Chr5 4703642 4706362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0405 486 776 Receptor kinase-like Gene Family AT5G45780 41.414 3.14e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo05g0405 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0405 - - gmx:100775269 1014.99