Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0398 GCCACATATTCAAGCTACCATGATTCATCCAAGTGCAGCCATGATGGCCCTTCCATCCACTATCCATTCCACATAAAAGGATCCCTCCCTGGCTTTGAACTCCTCTGCAAGGAAAACCTCACCACTATCCATTTTCCATCTTATGGTGATTTGGTTGTCAAATCCATTAGCTATGATACCAAAAAGATTCAGCTTCTTGATCCCAAGAACTGTGTTCATGGTGTCTTTCTCAACCTCAATCTCTCATCTACACCTTTCCAATACTACCATGTTCTGAAGAACTACACATACCTCAATTGCTCTACAAAGCTATCTACCCCTTCTTTCACTGAGGTTCCATGCTTGAGTGCCTCAGGTTCTCATGTTTACACTGTCGACCCTGAACTGCATGTGCCTGGTTCTTGCAACGGTTTCAAAACCGTGGCAATTCCCTTTGAGTATAGCCCTTATATCTCAGACAATAGTCTTGGTCTTGCATTGACATGGAACTTGCCGCATTCTGAAGAAAGAAAAGATAAAGCAATAAGCAAGACCACAGATTCCCACACAACACGTTACACAGTTTTAGGATTGAGCATGTGTTCTTTGGCGGTGGCAATTGCACTTATGATGATAAGCATAATAAAGGTTACTGGGTCCACATGGAATTGCAGTGAGAAAGAGGACCCATTATTGCAGAGCTTGCCAAATGTCTACTCCACTATATTCTAA 711 0.4262 ATYSSYHDSSKCSHDGPSIHYPFHIKGSLPGFELLCKENLTTIHFPSYGDLVVKSISYDTKKIQLLDPKNCVHGVFLNLNLSSTPFQYYHVLKNYTYLNCSTKLSTPSFTEVPCLSASGSHVYTVDPELHVPGSCNGFKTVAIPFEYSPYISDNSLGLALTWNLPHSEERKDKAISKTTDSHTTRYTVLGLSMCSLAVAIALMMISIIKVTGSTWNCSEKEDPLLQSLPNVYSTIF* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0398 236 PANTHER PROTEIN, PUTATIVE-RELATED 6 224 - -
Amo05g0398 236 Pfam Wall-associated receptor kinase galacturonan-binding 10 67 IPR025287 GO:0030247
Amo05g0398 236 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 224 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0398 12 188 C3H Transcription Factor Family AT2G25410 30.729 1.53e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0398 - - ahf:112747752 491.115