Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo05g0387 | ATGGGTATCTGCTTTTCATCCACCAAGGTCAGTGGCTCCAACAGCAACAACAACCACCATGGAAACGGAAACTCCGCGACCACCGTAAACCGGAACCGGAAACGGAATACAATTACTCAAGCAACGGTGACCAACCCGGCGGCGGCCACCACCACAGTGGCGAGCGTCCACAACGGTCAGCGGAGGAAGGACGATGAAAAGAAGAATAGTCATCATCATCATCATTCGCAGAAACCGAAGGAGAAGCCGAAGACGACGACGTTGACGACGAGAAAGAACGTGCCGTGCGGAAAGCGAACGGATTTCGGTTACGAGAAGAATTTCGACAAGAGATTCACGCTGGGGAAGCTTTTGGGTCATGGACAATTCGGTTACACCTATGTCGGTATTGATAAGGCCAATGGGGATCGTGTTGCCGTCAAGAGGCTCGAGAAGGCCAAGATGGTTCTACCCATAGCTGTTGAGGATGTTAAGCGAGAGGTCAAGATATTGAAAGAACTTACTGGCCATGAAAACGTGGTCCAATTCTATAATGCTTTTGAGGATGATTCATACGTGTACATAGTTATGGAGTTATGCGAGGGTGGAGAACTGCTAGATCGGATATTGGCCAAGAAGGACAGCCGTTACACTGAAAAAGATGCAGCAGTGATTGTAAGACAGATGCTTAAGGTTGCAGCTGAGTGTCATTTACACGGTTTGGTTCATCGGGACATGAAACCAGAGAACTTTCTTTTCAAGTCTACCAAAGAAGATTCACCTCTAAAGGCTACAGATTTTGGGTTGTCCGATTTCATAAAACCTGGTAAGAGGTTTCAAGATATTGTGGGCAGTGCTTACTATGTTGCACCAGAAGTGCTAAAAAGAAAGTCGGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACATACATTTTGCTCTGTGGTAGACGCCCATTTTGGGATAAGACCGAGGATGGTATCTTCAAGGAGGTCTTACGGAACAAGCCTGATTTCCGCCGCAAACCATGGCCATCCATAAGCAGTGCTGCCAAAGATTTCGTGAAGAAATTATTGGTAAAGGATCCTCGAGCAAGATTAACTGCTGCCCAGGCTCTATCACATCCATGGGTTAAAGAAGGAGGAGAGGCATTGGAGATGCCTATTGATATATCTGTCCTAAACAACATGCGACAATTTGTGAAGTATAGTCGATTGAAACAATTTGCGCTAAGGGCATTGGCTAGCACACTTGATGAAGAAGAGATATCTGATCTAAAAGATCAGTTTGATGCAATAGATGTTGACAAAAATGGTTCCATTAGCTTAGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAGGAATCACGTGTATTAGAGATATTGCAAGCGATAGATAGCAACACAGATGGGTTAGTCGATTTCACTGAATTTGTGGCGGCTGCATTACATGTACATCAATTGGAGGAACACAACTCTGAGAAATGGCATCAACGGTCACGAGCTGCCTTTGAGAAATTCGACATAGATAAGGATGGATATATTACTCCGGATGAACTTAGAATGCATACCGGCTTGAGGGGCTCCATTGATCCATTGCTTGAGGAAGCTGATATTGACAAGGATGGGAAAATCAGCCTATCGGAATTCCGAAGACTTCTCAGAACTGCAAGCATTAGTTCTCAACAAGTGACCAGCCCCCATCGGCGCAAGATGTAG | 1716 | 0.4534 | MGICFSSTKVSGSNSNNNHHGNGNSATTVNRNRKRNTITQATVTNPAAATTTVASVHNGQRRKDDEKKNSHHHHHSQKPKEKPKTTTLTTRKNVPCGKRTDFGYEKNFDKRFTLGKLLGHGQFGYTYVGIDKANGDRVAVKRLEKAKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVIVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISSAAKDFVKKLLVKDPRARLTAAQALSHPWVKEGGEALEMPIDISVLNNMRQFVKYSRLKQFALRALASTLDEEEISDLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAAALHVHQLEEHNSEKWHQRSRAAFEKFDIDKDGYITPDELRMHTGLRGSIDPLLEEADIDKDGKISLSEFRRLLRTASISSQQVTSPHRRKM* | 572 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo05g0387 | 571 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Amo05g0387 | 571 | ProSitePatterns | EF-hand calcium-binding domain. | 537 | 549 | IPR018247 | - | |
Amo05g0387 | 571 | ProSiteProfiles | Protein kinase domain profile. | 112 | 372 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo05g0387 | 571 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 494 | 529 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 415 | 450 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 452 | 487 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | SUPERFAMILY | Protein kinase-like (PK-like) | 110 | 385 | IPR011009 | - | |
Amo05g0387 | 571 | ProSitePatterns | Protein kinases ATP-binding region signature. | 118 | 141 | IPR017441 | GO:0005524 | |
Amo05g0387 | 571 | Pfam | EF-hand domain pair | 500 | 553 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | Pfam | EF-hand domain pair | 419 | 480 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | Pfam | Protein kinase domain | 113 | 372 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo05g0387 | 571 | ProSitePatterns | EF-hand calcium-binding domain. | 507 | 519 | IPR018247 | - | |
Amo05g0387 | 571 | ProSitePatterns | EF-hand calcium-binding domain. | 428 | 440 | IPR018247 | - | |
Amo05g0387 | 571 | Gene3D | - | 394 | 552 | - | - | |
Amo05g0387 | 571 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 532 | 559 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | SUPERFAMILY | EF-hand | 401 | 555 | IPR011992 | - | |
Amo05g0387 | 571 | SMART | efh_1 | 419 | 447 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | SMART | efh_1 | 498 | 526 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | SMART | efh_1 | 456 | 484 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | SMART | efh_1 | 528 | 556 | IPR002048 | GO:0005509 | |
Amo05g0387 | 571 | ProSitePatterns | EF-hand calcium-binding domain. | 465 | 477 | IPR018247 | - | |
Amo05g0387 | 571 | SMART | serkin_6 | 112 | 372 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo05g0387 | 571 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 234 | 246 | IPR008271 | GO:0004672|GO:0006468 | |
Amo05g0387 | 571 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Amo05g0387 | 571 | PANTHER | CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE | 23 | 562 | - | - | |
Amo05g0387 | 571 | CDD | STKc_CAMK | 111 | 371 | - | - | |
Amo05g0387 | 571 | Gene3D | - | 413 | 482 | - | - | |
Amo05g0387 | 571 | Gene3D | Phosphorylase Kinase; domain 1 | 105 | 197 | - | - | |
Amo05g0387 | 571 | Gene3D | Transferase(Phosphotransferase) domain 1 | 198 | 393 | - | - | |
Amo05g0387 | 571 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 23 | 562 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo05g0387 | Amo-Chr5 | 4517243 | 4522639 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo05g0387 | 1 | 566 | EF-hand Containing Proteins | AT2G17890 | 74.517 | 0.0 | 870 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Amo05g0387 | Pkinase | 2e-69 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo05g0387 | K13412 | - | gmx:100817249 | 919.842 |