Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0385 ATGATTTCATCTGCGTCCTTTCCTTCGTCTCTCCCCGCCGCTAACTTCATCGGAGGATCCGTCGCTCCGCCTCCTTCACGCGTCAGATCCCGCCCGATTGTCTCCTTCGCCACCGCTACAGCCACCGCAGAAGCACGCTCTACCTGGACGGACCAAAAGAGGCCTTCGTTTCTGAACCCAGACGCCATCGTCCCTTCCTGCAGTTCTCTCTATGAGGTTCTTGGTATTCCCGCCGGTGCCTCCAGCCAGGAGATCAAGGCGGCGTACCGGCGACTCGCCAGAGTCTGCCACCCGGACGTGGCGGCGATCGATCGGAAAAGCTCCTCGGCGGACGAGTTTATGAGGATTCACGATGCTTACTGTACTCTGTCGGATCCTGACAAGCGCGCCACTTACGATCGGAGCCTATTCGGGATGCGGCAACGGCCGTTGTCGACGGCGTCCGTATTTTCTGGCTACACCAGCCGGAACTGGGAAACGGACCAGTGCTGGTAG 495 0.596 MISSASFPSSLPAANFIGGSVAPPPSRVRSRPIVSFATATATAEARSTWTDQKRPSFLNPDAIVPSCSSLYEVLGIPAGASSQEIKAAYRRLARVCHPDVAAIDRKSSSADEFMRIHDAYCTLSDPDKRATYDRSLFGMRQRPLSTASVFSGYTSRNWETDQCW* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0385 164 Gene3D DnaJ domain 59 155 IPR036869 -
Amo05g0385 164 SUPERFAMILY Chaperone J-domain 32 132 IPR036869 -
Amo05g0385 164 CDD DnaJ 71 125 IPR001623 -
Amo05g0385 164 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Amo05g0385 164 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 164 - -
Amo05g0385 164 PRINTS DnaJ domain signature 71 89 IPR001623 -
Amo05g0385 164 PRINTS DnaJ domain signature 89 104 IPR001623 -
Amo05g0385 164 PRINTS DnaJ domain signature 108 128 IPR001623 -
Amo05g0385 164 PANTHER - 1 164 - -
Amo05g0385 164 SMART dnaj_3 68 128 IPR001623 -
Amo05g0385 164 Pfam DnaJ domain 70 133 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0385 Amo-Chr5 4498146 4499930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0385 71 133 C2H2 Transcription Factor Family AT1G74250 45.455 7.55e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0385 - - aip:107642575 310.457