Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0378 ATGTCGTTATTTGCCAGGGTTGTAGGTGGAGAAGAAGGTGGAAAATGGATAGGACTAGTAACCGCCATATGGGTTCAAGCAATATGTGGAAACAACTACACTTTCGCCAACTACTCCGATGTTTTGAAGTCCCTAATGTCTCTATCACAGATGCAACTCAACAATCTCTCTGTTGCTAAGGATGTTGGCAAGGCCTTTGGTCTTCTCTCTGGTCTTGCTTCTCATCACTTCTCTACTTCACTTATTCTCATTATTGGAGCCACCATGGGATTCATTGGTTATGGTCTTCAATACCTTGTTGTCAGCCAAACAATTACTCCACTCCCTTATTGGCTGATGTGTGTATTCTTGTGTATGGGGGGAAACAGCACAACATGGATGAACACAGCAGTTCTTGTTACTTGTATGAGGAACTTCCCGAAGAACAGAGGACCAATTTCTGGGATTCTAAAGGGTTATGTTGGACTCAGCACTGCAATCTTCACTGACATATGTTCTGCGTTGTTCTCCTCAGACCCTTCCAAGTTTCTGCTAATGCTTACCATTGTTCCTGCCGTCATTTGCTGCATTGCTGCTGTTTTCCTTCGCGAAACGCCGCCGGCTTCCACTTGTGCTCAAGAGAAGAAAGAAGCTCAGTTCCTCAACACATTCAACTTCATTGCTGTCATGGTAGCTGTTTATCTTTTAGCCTTTGATGTTAGCGGAATTCATGGCCATGTTTTTTCCTTGATTTTCACAGCTGGGCTTCTTATCCTATTGGTCATGCCGCTTCTTGTGCCTTTGTATGTGATCATCTTCAATAGTACTGATCTAGACGAAGAACAACAAATTCATGAAGCGTTGCTTGATGGGGACAAGAAGGTGGAGGAAGTTGAAATTATAAAACAAAAGCCTGTTATAGGGGAGGAACATAGCATAGGTGAAATGGTGAGAACCATTGAATTTTGGATCATGTTTGTGTCTTTCCTTTGTGGAGTAGGAACAGGAATGTGTGTGATGAACATGGGGCAGATGGGAGAAGCACTTGGTTACTCCGATGTTTCAATCTTCATTTCCTTCATTAGCATATGGGGTTTCTTCGGACGCATTGTTTCTGGCTCGCTCTCAGAATACTACATCAGAAAATCAGGGATGCCAAGGCTAGTATGGAATGCAGGTGCACAAATCCTTATGAGTATAGGGTACATTGCATTGGCTATGGCATTGCCAGGGTCACTATACATAGGTTCAATGGTAGTGGGAATATGCTATGGAGTTTACTTTACAATAACACCAGCAGCAGCTTCAGAGTTATTTGGGCTTAAATACTATGGCATAGTATACAACATTCTAATTCTGAACCTTCCTATTGGCTCATTCATCTTCTCTGGCCTCATTGCTGGCTACCTATATGATGTTGAAGCCACAAGTGTGCCTGGTGGGGGCAACACTTGCATTGGTGCACATTGTTATAGGCTTGTTTATGTCATTATGGCTTTTGCTTCTCTATTTGGCTGTGTCTTGGATGTGCTTCTTGCTGTTAGAACAAATAAGGTTTATTACAACATCTATCAAGACACAAGAAGCCTTGCCAATTCAATCCAATAG 1587 0.4253 MSLFARVVGGEEGGKWIGLVTAIWVQAICGNNYTFANYSDVLKSLMSLSQMQLNNLSVAKDVGKAFGLLSGLASHHFSTSLILIIGATMGFIGYGLQYLVVSQTITPLPYWLMCVFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPISGILKGYVGLSTAIFTDICSALFSSDPSKFLLMLTIVPAVICCIAAVFLRETPPASTCAQEKKEAQFLNTFNFIAVMVAVYLLAFDVSGIHGHVFSLIFTAGLLILLVMPLLVPLYVIIFNSTDLDEEQQIHEALLDGDKKVEEVEIIKQKPVIGEEHSIGEMVRTIEFWIMFVSFLCGVGTGMCVMNMGQMGEALGYSDVSIFISFISIWGFFGRIVSGSLSEYYIRKSGMPRLVWNAGAQILMSIGYIALAMALPGSLYIGSMVVGICYGVYFTITPAAASELFGLKYYGIVYNILILNLPIGSFIFSGLIAGYLYDVEATSVPGGGNTCIGAHCYRLVYVIMAFASLFGCVLDVLLAVRTNKVYYNIYQDTRSLANSIQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0378 528 Gene3D MFS general substrate transporter like domains 15 210 IPR036259 -
Amo05g0378 528 Gene3D MFS general substrate transporter like domains 307 512 IPR036259 -
Amo05g0378 528 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 522 - -
Amo05g0378 528 CDD MFS_Mch1p_like 14 499 - -
Amo05g0378 528 SUPERFAMILY MFS general substrate transporter 30 510 IPR036259 -
Amo05g0378 528 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 12 522 - -
Amo05g0378 528 Pfam Nodulin-like 15 261 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0378 Amo-Chr5 4408239 4410312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0378 15 522 Nodulin-like Gene Family AT4G34950 58.824 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0378 - - pop:18099178 683.715