Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0377 ATGGCTCTTCTAATTGTACCTCGTTGGTTGCTGTCCCTTGTTCTTCTCCTTCACTTTCTGTTGTGTTGCTTAGGAGTCAATGTTGTCACCGTTAATGTTGCTGCTGCCAAGGGCCTTATCAACACCGGCTACCTTTATCTCGATGTCAGAACTGTGGAGGAGTTTAGAAAAGGGCATGTAGATGCTGCTAAGGTCGTTAACATTCCATACATGTTGGATACACCCAAGGGTAAGGTCAAGAATCCAGACTTTCTAAAAGAGGTTTCATCTGTTTGCAACAAAGAAGACCATCTCGTTGTGGGTTGTCAAAGTGGAGTGAGATCTCTGTATGCAACTACCGATCTTGTTGCTGATGGCTACAAGGATGTGAAGGACATGGGAGGAGGTTATATGGAGTGGGTCAAAAACAAGTTTCCAGTGAAATCATCATTAGGGAAAGAGGATCTCTAA 450 0.4378 MALLIVPRWLLSLVLLLHFLLCCLGVNVVTVNVAAAKGLINTGYLYLDVRTVEEFRKGHVDAAKVVNIPYMLDTPKGKVKNPDFLKEVSSVCNKEDHLVVGCQSGVRSLYATTDLVADGYKDVKDMGGGYMEWVKNKFPVKSSLGKEDL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0377 149 ProSiteProfiles Rhodanese domain profile. 40 142 IPR001763 -
Amo05g0377 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 28 140 IPR036873 -
Amo05g0377 149 CDD RHOD 43 134 - -
Amo05g0377 149 Pfam Rhodanese-like domain 39 135 IPR001763 -
Amo05g0377 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 26 144 IPR044684 GO:0003824
Amo05g0377 149 SMART rhod_4 31 139 IPR001763 -
Amo05g0377 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 26 144 - -
Amo05g0377 149 Gene3D - 25 142 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0377 Amo-Chr5 4405760 4406984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0377 28 142 Sulfurtransferasese or Rhodanese AT5G66170 60.000 2.26e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0377 - K15692 aip:107642568 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0377 05 4405760 4406984 Amo01g0845 01 11661416 11663759 PCT
Amo01g0845 01 11661416 11663759 Amo05g0377 05 4405760 4406984 PCT