Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0372 ATGCTTTACTTGCAACGAAAACATACATCAGCATCTTCTTCTTCTTCCTCATCACTTTCTGTTGTTATAAAAACCCGAAAGCTGTCTTCATTCCGATCCATATATACATTGAGAATAATGGCGAAAGAGGGAGTAGCAGTTGACTTCGAGTACGCCAAGCAGATAGACAAGGCGCGTCGAGAACTACGCGCTCTTATCTCCTCCAGGAACTGCGCTCCTCTCATGCTCCGATTAGCATGGCACGATGCTGGTACCTATGATGCAAAGACGAGAACAGGAGGTGCCAATGGTTCCATTAGGAATCAACAGGAATTGAATCACCAAGCTAACAGGGGCTTGGAAACAGCTGTTCAATTTTGTGAGGAAGTGAAGGCCAAATGTCCCAGAGTTTCATATGCAGATCTTTACCAGCTAGCTGGTGTTATTGCGGTAGAGGTAACCGGGGGTCCAACAATTCGCTTTGTTCCTGGGAGAAAGGATTCACTGGAATCTCCACCAGAAGGGCGCCTTCCTGATGCTACAAAGGATGCACAGCATTTAAGGGATGTCTTTTATCGCATGGGTCTCACTGATAAAGACATAGTGGCTTTATCCGGAGGCCATACATTGGGTAAAGCACATAAAGAACGCTCAGGCTTTGAAGGCCAATGGACAGAGAACCATTTGAAGTTTGATAACTCCTATTTTGTAGAGCTAATGGATTCAAAAGATTCATTCAAGCTTCCAACAGACAAGGTTCTAGTTGAGGATCCTGAGTTCCGCAAGTATGTAGTGCGTTACAAAAATGATGAGGATGCTTTTTTCGCAGATTATGCAGAGTCACACAAGAAGCTCTCAGAGCGGGGGTTCAATCCAAATCGTGTTTCAGATAGCCGTATAGTCCATGGAGTTATAGGGTTTCTAGTTGCCTCAACTGTGATCGTGATGGGTTACTTAATTGAAATCAACAGAAAAAGCAAGTGA 963 0.4424 MLYLQRKHTSASSSSSSSLSVVIKTRKLSSFRSIYTLRIMAKEGVAVDFEYAKQIDKARRELRALISSRNCAPLMLRLAWHDAGTYDAKTRTGGANGSIRNQQELNHQANRGLETAVQFCEEVKAKCPRVSYADLYQLAGVIAVEVTGGPTIRFVPGRKDSLESPPEGRLPDATKDAQHLRDVFYRMGLTDKDIVALSGGHTLGKAHKERSGFEGQWTENHLKFDNSYFVELMDSKDSFKLPTDKVLVEDPEFRKYVVRYKNDEDAFFADYAESHKKLSERGFNPNRVSDSRIVHGVIGFLVASTVIVMGYLIEINRKSK* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0372 320 CDD ascorbate_peroxidase 50 286 - -
Amo05g0372 320 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Amo05g0372 320 Pfam Peroxidase 59 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 Gene3D - 58 282 - -
Amo05g0372 320 ProSiteProfiles Plant heme peroxidase family profile. 72 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 40 315 - -
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 259 283 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 169 186 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 104 128 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 148 160 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 187 208 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 209 233 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 51 71 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 129 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 72 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PRINTS Plant ascorbate peroxidase signature 90 100 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 40 315 IPR044831 GO:0004601|GO:0034599
Amo05g0372 320 Gene3D Peroxidase, domain 2 171 275 - -
Amo05g0372 320 SUPERFAMILY Heme-dependent peroxidases 52 296 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo05g0372 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0372 Amo-Chr5 4362141 4366944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0372 72 282 Peroxidase AT5G14130 27.273 3.11e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0372 K00434 - gmx:100806101 413.305