Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0359 ATGAAAAGCCTCTTCCTTGTATCGTTCCTTGCACCAAGTGCCCCAGTTGGAAGCAGACCCTTCTCTCAACATTTAACCACCAAGTGCTTTGGCAAGCAACTTCACTTCCACTCTCGATGTGTTCTTTTCTCTTCATACACATGTTCTGCAACGCTATCTGTTGTGCCGGACCTACAAGAAAAGGAAACATTTGATGGAGAGAAGGCTTCTTTGCTTCTCAAAGATCTCAGAAAGACCTTTAATTCGGGGAAGACAAAGAGCTATGAGTGGCGAATTTCACAGTTGGAAGGCATAGCCAAGATGCTAGAAGAGAAGGAGAAGGAAATTCTTGATGCTCTTAATAAAGACCTTTCTAAACCAGGATTGGAAGGATATATATCTGAGGTTTCCCAGGCAAAATCATCATGTAGTGAAGCACTTCAAGAACTGAAACACTGGATGAAGCCGGAAAAGGTCAAAACTTCATTCACCACATTACCATCATCAGCAGAGATTGTGTCAGAACCATTGGGAGCTGTGTTGGTCATCTCCACATGGAACTTCCCTTTCTTGTTATCAATGGATCCTGTCATTGGAGCCATATCAGCGGGTAACGCAGTGGTCTTGAAACCATCAGAAATTGCTCCGGCAACTTCATCACTACTTGCAAATTTGATTGAAGGTTATCTAGATAACTCTGCAATAAGAGTAGTTGAAGGGGCTATTCCTGAAACAACTGCACTCTTGGAACAGAAGTGGGATAAGATACTTTACACAGGTAGTGCTAGGGTCGGTCGCATTGTCATGGCTGCTGCTGCAAAGCACCTTACACCTGTGATTCTGGAACTCGGTGGAAAGTGTCCAGCTGTTGTTGATTCAGATGTCAATCTACAAGTTACTGCTAGGAGGATAATAGGTGGAAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGAATTTGCTCCAAAACTGATAAATGCTTTGAAAGAAGAGTTGAAGCAATTCTTTGGCGAAGATCTGATGGAATCAAAAGACATGTCTCGTATTGTGTCCCCGACCCAGTTTTCGCGGCTGGTGAAGCTCTTGGATGAAGATAAAGTATCTGACAAAATTGTTTTTGGAGGTCAGAGGGATGAGATGAAACTAAAGATTGCACCAACTATCATATTGGATGTTCCAGATGATGCAATGGTGATGCAAGAAGAGATATTTGGGCCAATAATGCCAATCATCACTGTAGAAAACATAGAAGATAGCTTTGGCATAATCAAATCTAAGCCAAAACCTCTTGCTGCTTATCTCTTTACAAACAATGAGCAGTTAAAGAAGGCATATGTGGAAAATATATCTTCTGGAGGGATGCTCATCAATGACACTGTCATACATGTTGCGACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAAAGTGGAATGGGATGTTACCACGGGAAGTTCTCTTTTGATAGTTTCAGCCATAAGAAGTCTGTCCTCTATAGAAGTTTTGATGCAGATTCATCCTTAAGGTTCCCTCCATATACACCCGAGAAGGAAAAATTGTTGAAGGCCATTTTCAGTGGCAACATTATTCGCATAATTCTTACTTTGCTTGGATGGTCTTAG 1626 0.417 MKSLFLVSFLAPSAPVGSRPFSQHLTTKCFGKQLHFHSRCVLFSSYTCSATLSVVPDLQEKETFDGEKASLLLKDLRKTFNSGKTKSYEWRISQLEGIAKMLEEKEKEILDALNKDLSKPGLEGYISEVSQAKSSCSEALQELKHWMKPEKVKTSFTTLPSSAEIVSEPLGAVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEIAPATSSLLANLIEGYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSDVNLQVTARRIIGGKWACNSGQACISVDYIITRKEFAPKLINALKEELKQFFGEDLMESKDMSRIVSPTQFSRLVKLLDEDKVSDKIVFGGQRDEMKLKIAPTIILDVPDDAMVMQEEIFGPIMPIITVENIEDSFGIIKSKPKPLAAYLFTNNEQLKKAYVENISSGGMLINDTVIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHKKSVLYRSFDADSSLRFPPYTPEKEKLLKAIFSGNIIRIILTLLGWS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0359 541 Coils Coil 95 115 - -
Amo05g0359 541 PANTHER ALDEHYDE DEHYDROGENASE 42 541 IPR012394 GO:0006081
Amo05g0359 541 PIRSF ALDH 55 537 IPR012394 GO:0006081
Amo05g0359 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 496 IPR016162 GO:0016491
Amo05g0359 541 Pfam Aldehyde dehydrogenase family 74 498 IPR015590 GO:0016491
Amo05g0359 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 478 IPR016163 GO:0016620
Amo05g0359 541 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 42 541 - -
Amo05g0359 541 SUPERFAMILY ALDH-like 73 513 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0359 Amo-Chr5 4282082 4285538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0359 1 541 Aldehyde Dehydrogenase Gene Family AT4G34240 62.615 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0359 K00128 - gmx:100800699 904.434