Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0354 ATGATAAGGTTTATCTTTAAAGCGATTCCTTATTATCATGTGGCTATAGTCATTCTTGTTATTATTTCATGTTGTGTCAAAGGTATGAGCTGTCAAGAACAGAATATACGAAAGAAGAATGAAAGTGTGCCAGCAATCTTTGTGTTTGGGGACTCCATAGTGGACACAGGTAACAACAACTACATCAAAACCATTGCGAAATGCAATTTCCCACCATATGGTAGAGACTTTGCTGCTGGAGGATATAAACCTAATGGGAGGTTCAGCAATGGTTTAGTCCCTTCAGATTTCATTGCTGAAATATTTGGAGTAAAAGATATTTTGCCACCATATCTGGATCCAAATCTGCAACTTCAAGAACTTCTTACTGGTGTAAGTTTTGCCTCGGGAGGCGCTGGATACGATCCTCTTACCTCAAAAGCAGCAGGTGCAATGTCACTATCAGATCAATTAGACAAATTGGGGGAGTACCAAAAGAAGATAAGGGAAGCAGTTGGAGAAAACAGAGCAGAAACAATAGTATCAAAGAGCATATACATAGTGTGCCTGGGAAGTGATGATATTGCTAACACTTACCTTCCATTTAGACAATCACAATATGATATTCCATCTTACACTGACTTAATGGCCTCACTAGCCTTCACATTCTTAAAGGAGCTTTATGGGGTAGGTGCTAGGAGGATTGGAGTGGTTAGCATGCCAATTATAGGGTGTGTGCCGTCACAGAGGACAGTAGAGGGAGGCATAAATAGAGCATGTTCAGATTTTGAAAATCAAGCTGCAATTCTATTCAACATGAAACTCCTCTCTCAAACAAAGCTCCTCAATAAACAGTTTCCAGATGCTAGGATCGTCTACCTCGATATTTACAACACATTGGATCAAGTGATTCAAAACCCAGCTCAATATGATTTTGAAGTAGTAGACAAAGGATGCTGTGGAACAGGAATTATAGAAGCGAGCATGTCCTGCAACTCCCTCAGCATAAACACATGTACCGATGATTCAAACTATATATTCTGGGATAGTTACCATCCTACCGAGAAAGCCTATAAATTGATCACTTCTATGGTGCTCCGTCACAAAATCAACGACTTCTTTTGA 1104 0.3976 MIRFIFKAIPYYHVAIVILVIISCCVKGMSCQEQNIRKKNESVPAIFVFGDSIVDTGNNNYIKTIAKCNFPPYGRDFAAGGYKPNGRFSNGLVPSDFIAEIFGVKDILPPYLDPNLQLQELLTGVSFASGGAGYDPLTSKAAGAMSLSDQLDKLGEYQKKIREAVGENRAETIVSKSIYIVCLGSDDIANTYLPFRQSQYDIPSYTDLMASLAFTFLKELYGVGARRIGVVSMPIIGCVPSQRTVEGGINRACSDFENQAAILFNMKLLSQTKLLNKQFPDARIVYLDIYNTLDQVIQNPAQYDFEVVDKGCCGTGIIEASMSCNSLSINTCTDDSNYIFWDSYHPTEKAYKLITSMVLRHKINDFF* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0354 367 Pfam GDSL-like Lipase/Acylhydrolase 46 355 IPR001087 GO:0016788
Amo05g0354 367 CDD SGNH_plant_lipase_like 44 359 IPR035669 -
Amo05g0354 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 366 - -
Amo05g0354 367 Gene3D SGNH hydrolase 30 362 IPR036514 -
Amo05g0354 367 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Amo05g0354 367 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 46 57 IPR008265 GO:0006629|GO:0016298
Amo05g0354 367 PANTHER GDSL ESTERASE/LIPASE EXL3 12 366 - -
Amo05g0354 367 SUPERFAMILY SGNH hydrolase 45 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0354 Amo-Chr5 4235670 4239216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0354 40 360 Pollen Coat Proteome AT1G75910 39.877 4.01e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0354 - - gmx:102668883 476.478